prot_H-elongata_contig45443.11618.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig45443.11618.1
Unique Nameprot_H-elongata_contig45443.11618.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length79
Homology
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BLAST of mRNA_H-elongata_contig45443.11618.1 vs. uniprot
Match: D8LAY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY1_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 3.300e-39
Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0 
Query:    1 QVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYDSCSGSLEKMREDAFMYYWSKSMIIDMESNDAPEQQGPV 78
            QV+FIPA RI NLD+RDTAATTEILREEMRKGSQSIISY++C+GSL KMREDAFMYYWSKSMIIDMESN+APEQQG V
Sbjct:  237 QVVFIPAQRIPNLDDRDTAATTEILREEMRKGSQSIISYENCNGSLPKMREDAFMYYWSKSMIIDMESNEAPEQQGSV 314
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BLAST of mRNA_H-elongata_contig45443.11618.1 vs. uniprot
Match: A0A6H5JP05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP05_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 7.900e-35
Identity = 64/78 (82.05%), Postives = 72/78 (92.31%), Query Frame = 0 
Query:    1 QVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYDSCSGSLEKMREDAFMYYWSKSMIIDMESNDAPEQQGPV 78
            QV+F+PA RI NLD+RDTAATTEILREEMRKGSQSIISY+SC+GSL +MR+DAF YYWSKSMIIDM SNDAP+QQG V
Sbjct:  763 QVVFLPAQRIPNLDDRDTAATTEILREEMRKGSQSIISYESCNGSLSQMRDDAFTYYWSKSMIIDMASNDAPDQQGSV 840
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig45443.11618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAY1_ECTSI3.300e-3987.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP05_9PHAE7.900e-3582.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig45443contigH-elongata_contig45443:1769..4137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig45443.11618.1mRNA_H-elongata_contig45443.11618.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig45443 1769..4137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig45443.11618.1 ID=prot_H-elongata_contig45443.11618.1|Name=mRNA_H-elongata_contig45443.11618.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp
QVIFIPAHRIQNLDERDTAATTEILREEMRKGSQSIISYDSCSGSLEKMR
EDAFMYYWSKSMIIDMESNDAPEQQGPV*
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