prot_H-elongata_contig20673.5917.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20673.5917.1
Unique Nameprot_H-elongata_contig20673.5917.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
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BLAST of mRNA_H-elongata_contig20673.5917.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.640e-35
Identity = 68/90 (75.56%), Postives = 79/90 (87.78%), Query Frame = 0 
Query:    1 RTATKTIPCLKGAKSNVNKHLRDVHELVGSKGATRTKNAQNRQGNIRAAMGASRTFDVGERRVKGLQAAKLVVEKLLPFTFFSTGDTFTE 90
            RT+TKT PC KG+KSNVNKH R+VH+LVG+KGA R +NAQN QGNIRAAMGAS+TF VG +RVK LQAAKLVVEK+LPF+FFS+G TF E
Sbjct:  118 RTSTKTTPCPKGSKSNVNKHFREVHQLVGAKGAVRMENAQNHQGNIRAAMGASKTFGVGGKRVKELQAAKLVVEKMLPFSFFSSGGTFKE 207
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20673.5917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJJ9_9PHAE2.640e-3575.56Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20673contigH-elongata_contig20673:2961..4070 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20673.5917.1mRNA_H-elongata_contig20673.5917.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20673 2961..4071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20673.5917.1 ID=prot_H-elongata_contig20673.5917.1|Name=mRNA_H-elongata_contig20673.5917.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
RTATKTIPCLKGAKSNVNKHLRDVHELVGSKGATRTKNAQNRQGNIRAAM
GASRTFDVGERRVKGLQAAKLVVEKLLPFTFFSTGDTFTE
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