prot_H-elongata_contig20671.5915.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20671.5915.1
Unique Nameprot_H-elongata_contig20671.5915.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length62
Homology
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Match: D8LJE9_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJE9_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 8.550e-33
Identity = 56/62 (90.32%), Postives = 60/62 (96.77%), Query Frame = 0
Query:    1 GEDKRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDRMLDMGFDEEVRR 62
            GEDKRSQIDPIQR G HCIVATPGRISDLLH+HK+HFDLCKYICLDEGDRMLDMGFDEEV++
Sbjct:  336 GEDKRSQIDPIQRQGVHCIVATPGRISDLLHTHKVHFDLCKYICLDEGDRMLDMGFDEEVQK 397          
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Match: A0A7S3XUS9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUS9_HETAK)

HSP 1 Score: 105 bits (263), Expect = 3.700e-25
Identity = 45/61 (73.77%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    1 GEDKRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDRMLDMGFDEEVR 61
            GED+R+Q+DP++R G HCIVATPGR+ DLL+S +I  DLCKYICLDEGDRMLD+GFDEEV+
Sbjct:  312 GEDRRAQVDPVKREGVHCIVATPGRLKDLLNSKQILLDLCKYICLDEGDRMLDLGFDEEVQ 372          
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Match: A0A836CIR5_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIR5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.090e-24
Identity = 46/61 (75.41%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 GEDKRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDRMLDMGFDEEVR 61
            GEDKR+Q  PI + G HCIVATPGR+SDLL+S KI+ D+C+YICLDEGDRMLD+GFDEEVR
Sbjct:  251 GEDKRTQFMPILQRGVHCIVATPGRLSDLLNSGKINLDVCRYICLDEGDRMLDLGFDEEVR 311          
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Match: A0A7R9UA62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA62_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 6.580e-22
Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 GEDKRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDRMLDMGFDEEVR 61
            GE KR QI  +QR G HCIVATPGR+ DLL++ KI+ D+CKY+ LDEGDRMLD+GFDEEV+
Sbjct:  304 GESKRDQITAVQRDGVHCIVATPGRLKDLLNARKINLDVCKYLVLDEGDRMLDLGFDEEVQ 364          
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Match: A0A7S2AYX9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AYX9_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 7.530e-22
Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    4 KRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDRMLDMGFDEEVR 61
            KR QI+P+QR G H +VATPGR+ DLL++ K + DLC+Y+CLDEGDRMLD+GFDEEV+
Sbjct:    1 KREQIEPVQRHGVHAVVATPGRLKDLLNTKKFNLDLCRYLCLDEGDRMLDLGFDEEVQ 58          
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Match: W4FU30_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FU30_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.260e-21
Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 GEDKRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDRMLDMGFDEEV 60
            G+DKR Q+D I + G H +VATPGR+ D L S K+H DLC+YICLDEGDRMLD+GFDEEV
Sbjct:  295 GQDKREQLDMIFKRGVHIVVATPGRLKDFLQSKKMHLDLCQYICLDEGDRMLDLGFDEEV 354          
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Match: A0A397DCK7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DCK7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.440e-21
Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 GEDKRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDRMLDMGFDEEV 60
            G+DKR Q+D I + G H +VATPGR+ D L S K+H DLC+YICLDEGDRMLD+GFDEEV
Sbjct:  303 GQDKREQLDMIFKRGVHIVVATPGRLKDFLQSKKMHLDLCQYICLDEGDRMLDLGFDEEV 362          
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Match: W4FS48_9STRA (Uncharacterized protein n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FS48_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.710e-21
Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 GEDKRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDRMLDMGFDEEV 60
            G+DKR Q+D I + G H +VATPGR+ D L S K+H DLC+YICLDEGDRMLD+GFDEEV
Sbjct:  295 GQDKREQLDMIFKRGVHIVVATPGRLKDFLQSKKMHLDLCQYICLDEGDRMLDLGFDEEV 354          
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Match: A0A024TCJ3_9STRA (RNA helicase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCJ3_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.510e-20
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 GEDKRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDRMLDMGFDEEV 60
            G+DKR Q+D I + G H +VATPGR+ D L S K++ DLC+YICLDEGDRMLD+GFDEEV
Sbjct:  292 GQDKREQLDMIFKRGVHIVVATPGRLKDFLQSKKMNLDLCQYICLDEGDRMLDLGFDEEV 351          
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Match: A0A7S1XQX1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQX1_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.510e-20
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 GEDKRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDRMLDMGFDEEVR 61
            GE KR QI  ++R G H +VATPGR+ DLL++ K++ +LCKY+CLDEGDRMLD+GFDEEV+
Sbjct:  314 GESKRDQIMQVEREGVHIVVATPGRLKDLLNARKMNLNLCKYLCLDEGDRMLDLGFDEEVQ 374          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20671.5915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJE9_ECTSI8.550e-3390.32DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S3XUS9_HETAK3.700e-2573.77Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CIR5_9STRA3.090e-2475.41RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7R9UA62_9STRA6.580e-2268.85Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2AYX9_9STRA7.530e-2267.24Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
W4FU30_9STRA1.260e-2168.33Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A397DCK7_9STRA1.440e-2168.33Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4FS48_9STRA1.710e-2168.33Uncharacterized protein n=13 Tax=Aphanomyces astac... [more]
A0A024TCJ3_9STRA1.510e-2066.67RNA helicase n=2 Tax=Aphanomyces invadans TaxID=15... [more]
A0A7S1XQX1_9STRA1.510e-2063.93Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..62
e-value: 1.6E-17
score: 65.4
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 13..62
NoneNo IPR availablePANTHERPTHR24031:SF584ATP-DEPENDENT RNA HELICASE DDX3Ycoord: 13..62
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 2..62
e-value: 5.8E-11
score: 42.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..62
score: 9.912
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20671contigH-elongata_contig20671:377..917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20671.5915.1mRNA_H-elongata_contig20671.5915.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20671 377..917 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20671.5915.1 ID=prot_H-elongata_contig20671.5915.1|Name=mRNA_H-elongata_contig20671.5915.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
GEDKRSQIDPIQRVGCHCIVATPGRISDLLHSHKIHFDLCKYICLDEGDR
MLDMGFDEEVRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase