prot_H-elongata_contig20592.5881.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20592.5881.1
Unique Nameprot_H-elongata_contig20592.5881.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Match: D7G7Y2_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Y2_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 2.360e-18
Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 0
Query:    1 MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWSV 41
            MVAPAFLTHMCIGSPWAWSVMSGT+SRELG+VSSAA DWS+
Sbjct:   43 MVAPAFLTHMCIGSPWAWSVMSGTISRELGIVSSAAGDWSM 83          
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Match: A0A835Z4T5_9STRA (Major facilitator transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T5_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.070e-15
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWSV 41
            MV PAFLTHMCIG+PWAWSVMS TLSRE GV  ++AADWS+
Sbjct:   87 MVLPAFLTHMCIGTPWAWSVMSSTLSREFGVAGASAADWSI 127          
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Match: A0A5A8E8W6_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E8W6_CAFRO)

HSP 1 Score: 72.4 bits (176), Expect = 9.480e-14
Identity = 31/41 (75.61%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWSV 41
            M+APAFLTHMCIG P+AWSVMS  L+RELGVV+++AADWS+
Sbjct:  112 MMAPAFLTHMCIGHPYAWSVMSSPLTRELGVVAASAADWSL 152          
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Match: A0A7S0STR4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STR4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.030e-11
Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    1 MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWSV 41
            M  PAF THMCIGSPWAWS+M+   +RE+G V+ AAADWS+
Sbjct:   69 MAIPAFGTHMCIGSPWAWSIMADVATREIGFVAPAAADWSL 109          
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Match: A0A7S1GCY3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCY3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.580e-11
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWS 40
            MV PAF TH+CIGSPW WSV++G + RE G V++AA DW+
Sbjct:   51 MVVPAFATHLCIGSPWGWSVLAGPVGREYGFVTAAAEDWT 90          
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Match: A0A0K2U1R3_LEPSM (Uncharacterized protein n=3 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2U1R3_LEPSM)

HSP 1 Score: 63.2 bits (152), Expect = 1.710e-10
Identity = 24/41 (58.54%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWSV 41
            M  PAF TH+C+GSP+ WS +SGT+++ELG V+ A+ADWS+
Sbjct:   51 MFVPAFATHVCLGSPYGWSAISGTINKELGFVAPASADWSL 91          
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Match: A0A482RXS0_9ARCH (MFS transporter n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXS0_9ARCH)

HSP 1 Score: 61.2 bits (147), Expect = 4.810e-10
Identity = 24/41 (58.54%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWSV 41
            M+ PAF+ H+CIGSP+AWS+M+  L+RELG V S+A DW++
Sbjct:   84 MLVPAFMNHLCIGSPYAWSMMADELTRELGFVVSSAQDWTL 124          
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Match: A0A0G4IRE8_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IRE8_PLABS)

HSP 1 Score: 59.3 bits (142), Expect = 3.890e-9
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWSV 41
            M  PA   H+CIGSP+AWS+++  ++RELG+VSSAA DW +
Sbjct:   71 MALPAVAAHLCIGSPYAWSLIADPMTRELGIVSSAAGDWGL 111          
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Match: A0A482RPS1_9ARCH (MFS transporter (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPS1_9ARCH)

HSP 1 Score: 58.9 bits (141), Expect = 4.120e-9
Identity = 23/41 (56.10%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    1 MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWSV 41
            M+ PA   H+CIGSP+AWS+M+ T+++E G V SAA+DWS+
Sbjct:   90 MIVPAAAIHLCIGSPYAWSLMADTITKEAGFVLSAASDWSL 130          
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Match: UPI000C782FD4 (uncharacterized protein LOC111700759 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C782FD4)

HSP 1 Score: 57.4 bits (137), Expect = 1.860e-8
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWSV 41
            M  PAF TH+C+G+P+ WS +S  L+RE G+V SAA+DW++
Sbjct:   72 MFVPAFATHVCLGAPYGWSAISSLLTRENGLVCSAASDWAL 112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20592.5881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7Y2_ECTSI2.360e-1890.24Major facilitator transporter n=2 Tax=Ectocarpus T... [more]
A0A835Z4T5_9STRA3.070e-1578.05Major facilitator transporter n=1 Tax=Tribonema mi... [more]
A0A5A8E8W6_CAFRO9.480e-1475.61Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
A0A7S0STR4_9STRA1.030e-1165.85Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S1GCY3_9STRA3.580e-1162.50Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A0K2U1R3_LEPSM1.710e-1058.54Uncharacterized protein n=3 Tax=Lepeophtheirus sal... [more]
A0A482RXS0_9ARCH4.810e-1058.54MFS transporter n=1 Tax=archaeon TaxID=1906665 Rep... [more]
A0A0G4IRE8_PLABS3.890e-956.10Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A482RPS1_9ARCH4.120e-956.10MFS transporter (Fragment) n=1 Tax=archaeon TaxID=... [more]
UPI000C782FD41.860e-853.66uncharacterized protein LOC111700759 n=1 Tax=Euryt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20592contigH-elongata_contig20592:6172..6297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20592.5881.1mRNA_H-elongata_contig20592.5881.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20592 6142..6297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20592.5881.1 ID=prot_H-elongata_contig20592.5881.1|Name=mRNA_H-elongata_contig20592.5881.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
MVAPAFLTHMCIGSPWAWSVMSGTLSRELGVVSSAAADWSV*
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