prot_H-elongata_contig205663.5869.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig205663.5869.1
Unique Nameprot_H-elongata_contig205663.5869.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Match: A0A835YSQ9_9STRA (Sorting and assembly machinery component 50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSQ9_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.840e-24
Identity = 51/88 (57.95%), Postives = 68/88 (77.27%), Query Frame = 0
Query:    1 RFSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASLPVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRAS 88
            R SS  E  RG+ AT+RS DGAHAL  E+  RD+ PRRHP VPYA+AASL V+ ++RPSV+SSM+Y++T D RD P+VP++G + +AS
Sbjct:  167 RTSSFTELSRGLVATLRSHDGAHALTGEMTWRDVMPRRHPTVPYAHAASLSVLRESRPSVRSSMRYAYTQDGRDSPYVPTVGPYLQAS 254          
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Match: W4GV81_9STRA (Omp85 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GV81_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.580e-18
Identity = 46/93 (49.46%), Postives = 60/93 (64.52%), Query Frame = 0
Query:    1 RFSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASLPVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRASVEGAG 93
            RFSS  E  RG T +V   +G H LA  +G RDI P R+  +P  YAAS  ++A+A PS KSS+KY++ DD R+DP +P+ G   RAS E AG
Sbjct:  169 RFSSFREKFRGGTVSVSDYNGVHDLAFNLGWRDIVPVRNKKIPNTYAASPSIMAEAVPSTKSSVKYTYNDDQRNDPTLPTSGRLLRASAEVAG 261          
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Match: A0A6G0XGW8_9STRA (POTRA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGW8_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.320e-17
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    1 RFSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASLPVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRASVEGAG 93
            RFSS  E  RG T +V   DG H LA  +G RDI P R+  +P  YAAS  ++A+A PS KSS+KY++ DD R+D  +P+ G   RAS E AG
Sbjct:  166 RFSSYREKFRGGTVSVSDYDGVHDLAFNLGWRDIVPVRNKKIPNTYAASPSIMAEAVPSTKSSIKYTYNDDQRNDSTLPTAGRLLRASTEVAG 258          
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Match: A0A024UXL9_9STRA (Omp85 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UXL9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.560e-16
Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 0
Query:    1 RFSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASLPVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRASVEGAG 93
            RFSS  E  RG T ++   +G H LA  +G RDI P R+  +P  YAAS  ++A+A PS KSS+KY+F DD R+D  +P+ G   R S E AG
Sbjct:  169 RFSSFREKFRGGTVSISDYNGVHDLAFNLGWRDIVPVRNKKIPNTYAASPSIMAEAVPSTKSSVKYTFNDDQRNDSTLPTSGRLLRVSAEVAG 261          
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Match: A0A067BSA8_SAPPC (POTRA domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BSA8_SAPPC)

HSP 1 Score: 81.3 bits (199), Expect = 5.520e-16
Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 0
Query:    1 RFSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASLPVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRASVEGAG 93
            RFSS  E  RG T ++   +  H LAL +G RDI P R+  +P  YAAS  ++A+A PS KSS+KY + DD R+D  +P+ G   R S+E AG
Sbjct:  165 RFSSYHERFRGGTVSLTDDESRHELALNLGWRDIVPVRNKKIPSTYAASPSIMAEAEPSTKSSIKYVYNDDQRNDAALPTAGRLLRTSMEVAG 257          
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Match: W7U1Z2_9STRA (Sorting and assembly machinery component 50 putative n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1Z2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 7.410e-16
Identity = 43/93 (46.24%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    1 RFSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASLPVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRASVEGAG 93
            R SSL E  + V   + + +  H L+ E+ LRDI PRRH   P+AY ASL ++ +A PS+KS  +Y FTDD +DD  +PS G+FF   +E AG
Sbjct:  163 RTSSLSEKVQAVAFHLTTHNRRHRLSYELALRDILPRRHLSTPFAYDASLSIMREATPSLKSVFRYKFTDDRQDDSVLPSSGTFFSGLLELAG 255          
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Match: A0A485LIX1_9STRA (Aste57867_21946 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIX1_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 7.590e-16
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    1 RFSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASLPVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRASVEGAG 93
            RFSS  E  RG T +V   +G H LA  +G RDI P R+  +P  YAAS  ++A+A PS KSS+KY++ DD R++  +P+ G   RAS E AG
Sbjct:  168 RFSSYREKFRGGTVSVSDYNGVHDLAFNLGWRDIVPVRNKKIPNTYAASPGIMAEAVPSTKSSIKYTYNDDQRNNSTLPTTGRLLRASAEVAG 260          
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Match: F0W4E7_9STRA (Sorting and assembly machinery component 50 putativ n=10 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4E7_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.620e-15
Identity = 43/92 (46.74%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    2 FSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASLPVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRASVEGAG 93
            FSS  E  RG    +    G H L+L  G RDI P+R   +P  + AS  ++A A+PSVK+S+KYSF DD RDDP +P  GS    S E AG
Sbjct: 1379 FSSYSEKVRGALVALCDEFGRHELSLHCGWRDIIPKRDKTIPTIFHASPSILAQAQPSVKTSVKYSFNDDDRDDPMLPCFGSLLHCSTEIAG 1470          
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Match: A0A1V9ZWW2_9STRA (Sorting and assembly machinery component 50 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWW2_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.620e-15
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 0
Query:    1 RFSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASLPVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRASVEGAG 93
            RFSS  E  RG T ++   +  H LA  +G RDI P R+  +P  YAAS  ++A+A PS KSS+KY + DD R+D  +P+ G   R S+E AG
Sbjct:  165 RFSSYHEKFRGGTMSLTDDENRHELAFNLGWRDIVPIRNKKIPSTYAASPSIMAEAEPSTKSSVKYVYNDDQRNDSALPTSGRLLRTSLEVAG 257          
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Match: A0A1V9ZEL1_9STRA (Sorting and assembly machinery component 50 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEL1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.620e-15
Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 0
Query:    1 RFSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASLPVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRASVEGAG 93
            RFSS  E  RG T ++   +  H L++ +G RDI P R+  +P  YAAS  ++A+A PS KSS+KY + DD R+D  +P+ G   R S+E AG
Sbjct:  165 RFSSYHERFRGGTVSLTDENNRHELSMNLGWRDIVPVRNKKIPSTYAASPSIMAEAEPSTKSSVKYVYNDDQRNDAALPTAGRLLRTSLEVAG 257          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig205663.5869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSQ9_9STRA1.840e-2457.95Sorting and assembly machinery component 50 n=1 Ta... [more]
W4GV81_9STRA6.580e-1849.46Omp85 domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A6G0XGW8_9STRA2.320e-1749.46POTRA domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A024UXL9_9STRA1.560e-1647.31Omp85 domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A067BSA8_SAPPC5.520e-1646.24POTRA domain-containing protein n=3 Tax=Saprolegni... [more]
W7U1Z2_9STRA7.410e-1646.24Sorting and assembly machinery component 50 putati... [more]
A0A485LIX1_9STRA7.590e-1647.31Aste57867_21946 protein n=1 Tax=Aphanomyces stella... [more]
F0W4E7_9STRA1.620e-1546.74Sorting and assembly machinery component 50 putati... [more]
A0A1V9ZWW2_9STRA3.620e-1545.16Sorting and assembly machinery component 50 n=1 Ta... [more]
A0A1V9ZEL1_9STRA3.620e-1544.09Sorting and assembly machinery component 50 n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig205663contigH-elongata_contig205663:537..815 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig205663.5869.1mRNA_H-elongata_contig205663.5869.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig205663 537..815 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig205663.5869.1 ID=prot_H-elongata_contig205663.5869.1|Name=mRNA_H-elongata_contig205663.5869.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
RFSSLLEHRRGVTATVRSSDGAHALALEIGLRDITPRRHPGVPYAYAASL
PVVADARPSVKSSMKYSFTDDSRDDPFVPSMGSFFRASVEGAG
back to top