prot_H-elongata_contig205311.5855.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig205311.5855.1
Unique Nameprot_H-elongata_contig205311.5855.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
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BLAST of mRNA_H-elongata_contig205311.5855.1 vs. uniprot
Match: A0A1E7EJM5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EJM5_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 4.940e-5
Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 0 
Query:    6 FPLIVNTSHMAQMREDIARNMGQ-STFEEAFHILCDDKSRKYSQFDIMFNYLWHNKHDEYFWSIARVGN 73
            FP+I++  H+  +R++I R   +  TF++ F  L  +K   YSQF IMF YLW +  ++Y W     GN
Sbjct:  254 FPVILHRKHLPMIRQEILRVHPEFDTFDDFFKFLSREKDA-YSQFCIMFEYLWMHHRNDYNWHFEADGN 321
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig205311.5855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1E7EJM5_9STRA4.940e-537.68Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig205311contigH-elongata_contig205311:170..388 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig205311.5855.1mRNA_H-elongata_contig205311.5855.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig205311 170..388 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig205311.5855.1 ID=prot_H-elongata_contig205311.5855.1|Name=mRNA_H-elongata_contig205311.5855.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
MTPYSFPLIVNTSHMAQMREDIARNMGQSTFEEAFHILCDDKSRKYSQFD
IMFNYLWHNKHDEYFWSIARVGN
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