prot_H-elongata_contig20493.5840.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20493.5840.1
Unique Nameprot_H-elongata_contig20493.5840.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length155
Homology
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BLAST of mRNA_H-elongata_contig20493.5840.1 vs. uniprot
Match: D8LEB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEB0_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 1.520e-70
Identity = 113/155 (72.90%), Postives = 133/155 (85.81%), Query Frame = 0 
Query:    1 MRAVTSGQGEFLARRGFASGLVAHFLEETNSEFRVLQGETSAGMDAEQLEEAAVCLEEAFEPAVKRLRVKQSTEVVLDSLFEGVDDAGPFVVRFEVTITRCHPEDLEASSANALQLCAPAIREVMNKEGVMEREMHEIVFVGRPMWELVSPVLDL 155
            MRA+TSGQGEFLARRGFA+GLV+HFLEETN EFRVLQG  S GM+A+QLE+AA  LEE F PAVKRLR + S +VVLDSLF+G DDAG FVVRFEVT+TRCHPED+++S A AL+ CA AI+E +  EGV +++ HE+VFVGRPMWELVSPVLDL
Sbjct:  314 MRALTSGQGEFLARRGFAAGLVSHFLEETNCEFRVLQGGASCGMNAQQLEDAAARLEEVFVPAVKRLRARSSVDVVLDSLFQGADDAGDFVVRFEVTLTRCHPEDIDSSPAPALRECASAIKEAVRDEGVNDKDTHEVVFVGRPMWELVSPVLDL 468
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20493.5840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEB0_ECTSI1.520e-7072.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.640.10coord: 17..116
e-value: 1.7E-6
score: 28.9
NoneNo IPR availableGENE3D3.30.420.40coord: 117..142
e-value: 1.7E-6
score: 28.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20493contigH-elongata_contig20493:3..2419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20493.5840.1mRNA_H-elongata_contig20493.5840.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20493 3..2446 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20493.5840.1 ID=prot_H-elongata_contig20493.5840.1|Name=mRNA_H-elongata_contig20493.5840.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp
MRAVTSGQGEFLARRGFASGLVAHFLEETNSEFRVLQGETSAGMDAEQLE
EAAVCLEEAFEPAVKRLRVKQSTEVVLDSLFEGVDDAGPFVVRFEVTITR
CHPEDLEASSANALQLCAPAIREVMNKEGVMEREMHEIVFVGRPMWELVS
PVLDL
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