prot_H-elongata_contig20475.5831.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20475.5831.1
Unique Nameprot_H-elongata_contig20475.5831.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
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BLAST of mRNA_H-elongata_contig20475.5831.1 vs. uniprot
Match: D7FIA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIA2_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 5.930e-16
Identity = 32/42 (76.19%), Postives = 39/42 (92.86%), Query Frame = 0 
Query:    2 DHCQAAVTHVRSQAMAVRKTTAEYLRGELLRGEHVTSGDPKW 43
            +HC AAVTHVRS+A A+RKTT+EYL+GELLRGE +T+GDPKW
Sbjct:    2 EHCNAAVTHVRSKAAAIRKTTSEYLKGELLRGERLTNGDPKW 43
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20475.5831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIA2_ECTSI5.930e-1676.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20475contigH-elongata_contig20475:73..204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20475.5831.1mRNA_H-elongata_contig20475.5831.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20475 73..204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20475.5831.1 ID=prot_H-elongata_contig20475.5831.1|Name=mRNA_H-elongata_contig20475.5831.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
QDHCQAAVTHVRSQAMAVRKTTAEYLRGELLRGEHVTSGDPKW*
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