prot_H-elongata_contig204697.5830.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig204697.5830.1
Unique Nameprot_H-elongata_contig204697.5830.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length171
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig204697.5830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 142..164
e-value: 130.0
score: 4.4
coord: 27..49
e-value: 2.7
score: 17.0
coord: 50..72
e-value: 31.0
score: 9.6
coord: 113..135
e-value: 13.0
score: 12.8
coord: 90..112
e-value: 180.0
score: 3.2
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 31..49
e-value: 0.082
score: 12.7
coord: 145..162
e-value: 0.073
score: 12.9
coord: 116..133
e-value: 0.06
score: 13.2
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 114..143
score: 7.089
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 143..171
score: 7.272
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 28..55
score: 6.852
NoneNo IPR availableGENE3D1.20.5.190coord: 113..162
e-value: 1.1E-6
score: 30.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig204697contigH-elongata_contig204697:3..933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig204697.5830.1mRNA_H-elongata_contig204697.5830.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig204697 3..934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig204697.5830.1 ID=prot_H-elongata_contig204697.5830.1|Name=mRNA_H-elongata_contig204697.5830.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp
EYRRTILAVKKIQTFWRGAAALAFYRKQIGAVISVQSRWRCAVARSRYRR
SVAASIVIQATVRCALAFAEYRRTISAVQRIQMWWRLKQNEAAACTAIAA
WWRSVRGVERFRRTRDIVVALQSIFRGRRTRREVGALGRRFSRYRAAKMI
QAALRGMSVRRAACRQIAVAR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS