prot_H-elongata_contig20456.5821.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20456.5821.1
Unique Nameprot_H-elongata_contig20456.5821.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Match: D7G810_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G810_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 1.450e-27
Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    1 LLIVDFTAGWCKPCKRMAPVFKKLAGEHKGAAK-FVNVDIDDLPEAFDGLSIPAFQVLQGGTKIDGLSGAQEERLRQMIDKH 81
            LL+VDFTA WCKPC+ MAP+F+ LA E+KGAA  F  VDID+LPE FDG SIPAF V + G K+D ++G+ E +LR+++  H
Sbjct:   66 LLVVDFTASWCKPCRAMAPIFEGLAKENKGAAAVFAKVDIDNLPETFDGTSIPAFYVFKNGVKVDSVTGSGESKLRKLVADH 147          
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Match: A0A7J6R6D8_PEROL (Thioredoxin domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6R6D8_PEROL)

HSP 1 Score: 87.4 bits (215), Expect = 7.350e-20
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    1 LLIVDFTAGWCKPCKRMAPVFKKLAGEHKGAAKFVNVDIDDLPE-AFDG--LSIPAFQVLQGGTKIDGLSGAQEERLRQMIDKHCK 83
            + IVD++A WC PC+ +APVF +LAG++KG AKFV VD+D L + A D    S+PAF + +G  K++ + GA  ERLR ++ K C+
Sbjct:   83 MFIVDYSAEWCHPCQLIAPVFAELAGQYKGKAKFVRVDVDVLDDLALDNGVTSLPAFHIYKGNEKLETVVGANPERLRAVVAKRCE 168          
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Match: A0A0M0JU45_9EUKA (Thioredoxin h-type-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JU45_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 1.410e-19
Identity = 41/84 (48.81%), Postives = 61/84 (72.62%), Query Frame = 0
Query:    1 LLIVDFTAGWCKPCKRMAPVFKKLAGEHKGAAKFVNVDID---DLPEAFDGLSIPAFQVLQGGTKIDGLSGAQEERLRQMIDKH 81
            +++VDFTA WC PC+R+AP+F +LA +H G A FV VD+D   DL  + + L++P FQ+ +GG K+D L+GA E++L  M+ KH
Sbjct:   97 VMVVDFTAVWCGPCQRIAPLFAELAKQH-GNALFVKVDVDELEDLMHSCEVLAMPTFQIYKGGEKVDTLTGANEKKLVDMVAKH 179          
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Match: A0A7J6L7E3_PERCH (Thioredoxin domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6L7E3_PERCH)

HSP 1 Score: 86.7 bits (213), Expect = 1.470e-19
Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    1 LLIVDFTAGWCKPCKRMAPVFKKLAGEHKGAAKFVNVDID---DLPEAFDGLSIPAFQVLQGGTKIDGLSGAQEERLRQMIDKHCK 83
            LL+VD++A WCKPC++MAP+F  LA E+K  A FV+VD+D   DL       S+PAF++ QG   ++ + GA E++LR  + K C+
Sbjct:   81 LLVVDYSAEWCKPCQKMAPIFADLALEYKDKAAFVHVDVDECDDLAMDHGVASLPAFRIYQGSETLESIVGADEKKLRAAVSKRCR 166          
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Match: A0A7S3XI80_OXYMA (Hypothetical protein n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3XI80_OXYMA)

HSP 1 Score: 85.9 bits (211), Expect = 5.070e-19
Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 LLIVDFTAGWCKPCKRMAPVFKKLAGEHKGAAKFVNVDID---DLPEAFDGLSIPAFQVLQGGTKIDGLSGAQEERLRQMIDKHC 82
            LL+VD++A WCKPC++MAP+F  LA E+K  A FV+VD+D   DL       S+PAF++ QG   ++ + GA E++LR  + K C
Sbjct:  105 LLVVDYSAEWCKPCQKMAPIFADLALEYKDKAAFVHVDVDECDDLAMDHGVASLPAFRIYQGSETLESIVGADEKKLRAAVSKRC 189          
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Match: A0A2R5GP11_9STRA (Thioredoxin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GP11_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 5.400e-19
Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    3 IVDFTAGWCKPCKRMAPVFKKLAGE---HKGAAKFVNVDIDDLPEAFDGLSI---PAFQVLQGGTKIDGLSGAQEERLRQMIDKHCK 83
            +  FTA WC PCK++APVFK+L  E    K +AKFV +D+D+L E    + +   P F V + G+++D L GA E++LR ++ KHCK
Sbjct:  109 VAKFTADWCGPCKKIAPVFKELCAEVNAAKNSAKFVEIDVDELDEVSADVKVSAMPTFVVFKNGSEVDRLMGAHEDKLRALVAKHCK 195          
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Match: A0A7J6U5X6_PEROL (Thioredoxin domain-containing protein n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6U5X6_PEROL)

HSP 1 Score: 86.3 bits (212), Expect = 9.990e-19
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    1 LLIVDFTAGWCKPCKRMAPVFKKLAGEHKGAAKFVNVDIDDLPE-AFDG--LSIPAFQVLQGGTKIDGLSGAQEERLRQMIDKHCK 83
            + IVD++A WC PC+ +APVF +LAG++KG AKFV VD+D L + A D    S+PAF + +G  K++ + GA  E+LR ++ K C+
Sbjct:  159 MFIVDYSAEWCHPCQLIAPVFAELAGQYKGKAKFVRVDVDVLDDLALDNGVTSLPAFHIYKGNEKLETVVGANPEKLRAVVAKRCE 244          
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Match: A0A8C6U661_9GOBI (Thioredoxin n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6U661_9GOBI)

HSP 1 Score: 81.3 bits (199), Expect = 3.870e-18
Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 LLIVDFTAGWCKPCKRMAPVFKKLAGEHKGAAKFVNVDIDDLPE--AFDGL-SIPAFQVLQGGTKIDGLSGAQEERLRQMIDKH 81
            L+++DFTA WC PCK +AP F+KLAG+HK    F+ VDIDD  E  A  G+ S+P F   +GG K+D +SGA    L+  I KH
Sbjct:   22 LVVIDFTAKWCPPCKAIAPEFEKLAGQHKDVV-FLKVDIDDAKELSAKHGIRSVPTFLFFKGGAKVDTMSGADLNGLKARILKH 104          
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Match: UPI00038A5F66 (LECA THIOREDOXIN n=1 Tax=synthetic construct TaxID=32630 RepID=UPI00038A5F66)

HSP 1 Score: 81.3 bits (199), Expect = 3.980e-18
Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    1 LLIVDFTAGWCKPCKRMAPVFKKLAGEHKGAAKFVNVDIDDLPEA---FDGLSIPAFQVLQGGTKIDGLSGAQEERLRQMIDKHC 82
            L++VDF A WC PCK +AP F++L+ E+     F+ VD+D++P+    +   S+P F+  + G K+D L GA +E+L+QMI KH 
Sbjct:   21 LVVVDFFATWCGPCKMIAPFFEELSEEYPDKVVFIKVDVDEVPDVAAKYGITSMPTFKFFKNGKKVDELVGANQEKLKQMILKHA 105          
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Match: Q685V4_MESGB (Thioredoxin-1 (Fragment) n=8 Tax=Mesobuthus TaxID=34646 RepID=Q685V4_MESGB)

HSP 1 Score: 81.6 bits (200), Expect = 4.740e-18
Identity = 36/84 (42.86%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    1 LLIVDFTAGWCKPCKRMAPVFKKLAGEHKGAAKFVNVDIDD---LPEAFDGLSIPAFQVLQGGTKIDGLSGAQEERLRQMIDKH 81
            L+++DF A WC PCK++AP  +KL  E+ G   F+ VD+D+   L + F+   +P F +L+   K+D  SGA +E+LR+M+DKH
Sbjct:   39 LVVIDFFATWCGPCKQIAPFIEKLEQENSGNVVFLKVDVDENEELAQTFNVSCMPTFILLKNRNKVDEFSGANQEKLREMVDKH 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20456.5821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G810_ECTSI1.450e-2758.54Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A7J6R6D8_PEROL7.350e-2047.67Thioredoxin domain-containing protein n=1 Tax=Perk... [more]
A0A0M0JU45_9EUKA1.410e-1948.81Thioredoxin h-type-like protein n=1 Tax=Chrysochro... [more]
A0A7J6L7E3_PERCH1.470e-1945.35Thioredoxin domain-containing protein n=1 Tax=Perk... [more]
A0A7S3XI80_OXYMA5.070e-1945.88Hypothetical protein n=1 Tax=Oxyrrhis marina TaxID... [more]
A0A2R5GP11_9STRA5.400e-1944.83Thioredoxin n=1 Tax=Hondaea fermentalgiana TaxID=2... [more]
A0A7J6U5X6_PEROL9.990e-1946.51Thioredoxin domain-containing protein n=5 Tax=Perk... [more]
A0A8C6U661_9GOBI3.870e-1850.00Thioredoxin n=1 Tax=Neogobius melanostomus TaxID=4... [more]
UPI00038A5F663.980e-1842.35LECA THIOREDOXIN n=1 Tax=synthetic construct TaxID... [more]
Q685V4_MESGB4.740e-1842.86Thioredoxin-1 (Fragment) n=8 Tax=Mesobuthus TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..86
e-value: 8.9E-22
score: 78.9
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 1..81
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 2..80
e-value: 8.2E-17
score: 61.1
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..83
score: 9.034
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 2..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20456contigH-elongata_contig20456:2023..2972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20456.5821.1mRNA_H-elongata_contig20456.5821.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20456 2023..2972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20456.5821.1 ID=prot_H-elongata_contig20456.5821.1|Name=mRNA_H-elongata_contig20456.5821.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
LLIVDFTAGWCKPCKRMAPVFKKLAGEHKGAAKFVNVDIDDLPEAFDGLS
IPAFQVLQGGTKIDGLSGAQEERLRQMIDKHCKKAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf