prot_H-elongata_contig20423.5811.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20423.5811.1
Unique Nameprot_H-elongata_contig20423.5811.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Match: D7G0W4_ECTSI (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W4_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.480e-33
Identity = 73/87 (83.91%), Postives = 78/87 (89.66%), Query Frame = 0
Query:    1 MVIVTLLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLAEAGTVAEESLSSMPTVRSFAAEKRETKEYANTLHHNT 87
            MV+VTLLFMFY+SWRLSLVAFISVPAIVIVSK+YG YIRKLSKLSQDKLAEAG+VAEESL SM TVRSFAAE RE+KEYA  L   T
Sbjct:  214 MVVVTLLFMFYLSWRLSLVAFISVPAIVIVSKWYGEYIRKLSKLSQDKLAEAGSVAEESLGSMSTVRSFAAEGRESKEYAKKLQDRT 300          
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Match: A0A7S4DAM6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAM6_HETAK)

HSP 1 Score: 100 bits (249), Expect = 5.510e-24
Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 0
Query:    5 TLLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLAEAGTVAEESLSSMPTVRSFAAEKRETKEYANTL 83
            TL+FMFY+SW++S+VAF+SVP IV++SK+YG Y++KLSK +QD LA+A T AEE+LSSM T+RSFA E  E  EYA  L
Sbjct:   24 TLMFMFYLSWKISMVAFVSVPVIVLISKFYGRYLQKLSKKTQDALADANTTAEETLSSMTTIRSFACEDCEALEYARRL 102          
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Match: A0A835YSY9_9STRA (ABC transporter type 1, transmembrane domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSY9_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.900e-22
Identity = 57/85 (67.06%), Postives = 66/85 (77.65%), Query Frame = 0
Query:    5 TLLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLAEAGTVAEESLSSMPTVRSFAAEKRETKEYANTLHHNTAL 89
            TLLFMFY+SWRLS VAF+SVPAIV VS+YYG +IR L+K  Q++LAEA  VAEE+L SM TVRSFAAE RE+  Y   LH   AL
Sbjct:  212 TLLFMFYLSWRLSTVAFVSVPAIVGVSRYYGHFIRDLAKQVQERLAEANAVAEEALGSMTTVRSFAAEGRESAAYGARLHDYYAL 296          
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Match: W7TKE5_9STRA (Atp-binding cassette sub-family b member 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKE5_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.650e-19
Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 0
Query:    5 TLLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLAEAGTVAEESLSSMPTVRSFAAEKRETKEYANTL 83
            TL+FMF  SW+LSLVAF+SVP IVI+SK YG YIRKLSK +Q++LA A ++AEE LS+MPTVRSFA    + + Y   L
Sbjct:  488 TLIFMFIQSWKLSLVAFVSVPVIVIMSKIYGQYIRKLSKATQERLAHANSIAEECLSTMPTVRSFAGGPAQGRLYRGKL 566          
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Match: A0A7S2YRV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRV9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 7.450e-18
Identity = 45/74 (60.81%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    6 LLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLAEAGTVAEESLSSMPTVRSFAAEKRETKEY 79
            L+FMF +SW+LSL+AFI++PA+ I+SK+YG YIR+LSKL Q KLA+  +V+E +LSSM TVRSF AE  E  E+
Sbjct:  359 LIFMFVISWQLSLLAFITIPAVSILSKWYGRYIRRLSKLQQKKLADGNSVSESTLSSMSTVRSFGAETVELSEF 432          
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Match: A0A7S1CY43_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY43_CYCTE)

HSP 1 Score: 84.3 bits (207), Expect = 1.010e-17
Identity = 44/78 (56.41%), Postives = 60/78 (76.92%), Query Frame = 0
Query:    2 VIVTLLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLAEAGTVAEESLSSMPTVRSFAAEKRETKEY 79
            VI  L+FMF  SW+LSL+AF+SVP I I+SK+YG ++RKLSKL Q KLA+  +V+E ++ SM TVR+F A + E KE+
Sbjct:   11 VIGVLIFMFLSSWQLSLIAFVSVPVITILSKWYGEFVRKLSKLMQKKLADGNSVSEAAMGSMATVRAFDAAESELKEF 88          
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Match: A0A7S2PB77_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PB77_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.370e-17
Identity = 43/74 (58.11%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    6 LLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLAEAGTVAEESLSSMPTVRSFAAEKRETKEY 79
            L+FMF VSWRL+++  +SVPAI I+SK YG+++RKL+KL Q KLA+  T++E ++SSMPTVR+F AE  E +EY
Sbjct:  522 LVFMFLVSWRLTMLVLLSVPAITIMSKLYGAFMRKLTKLMQKKLADGNTISEAAISSMPTVRAFGAEMAELREY 595          
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Match: A0A7S2KWJ3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KWJ3_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.380e-17
Identity = 43/74 (58.11%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    6 LLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLAEAGTVAEESLSSMPTVRSFAAEKRETKEY 79
            L+FMF VSWRL+++  +SVPAI I+SK YG+++RKL+KL Q KLA+  T++E ++SSMPTVR+F AE  E +EY
Sbjct:  261 LVFMFLVSWRLTMLVLLSVPAITIMSKLYGAFMRKLTKLMQKKLADGNTISEAAISSMPTVRAFGAEMAELREY 334          
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Match: A0A7S2PB08_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PB08_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.420e-17
Identity = 43/74 (58.11%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    6 LLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLAEAGTVAEESLSSMPTVRSFAAEKRETKEY 79
            L+FMF VSWRL+++  +SVPAI I+SK YG+++RKL+KL Q KLA+  T++E ++SSMPTVR+F AE  E +EY
Sbjct:  521 LVFMFLVSWRLTMLVLLSVPAITIMSKLYGAFMRKLTKLMQKKLADGNTISEAAISSMPTVRAFGAEMAELREY 594          
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Match: A0A1E7FK35_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK35_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.130e-16
Identity = 45/88 (51.14%), Postives = 65/88 (73.86%), Query Frame = 0
Query:    2 VIVTLLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLAEAGTVAEESLSSMPTVRSFAAEKRETKEYANTLHHNTAL 89
            VI  L+FMF VSW+LSL+AFISVP I ++SK+YG+++R L+K+ Q KLA+  +V+E ++SSMPTVR+F A   E +E+   +    AL
Sbjct:   89 VIGVLIFMFMVSWQLSLLAFISVPVITVLSKWYGNFVRSLTKVMQTKLAQGNSVSEAAISSMPTVRAFDAGPTEYREFKGHMDEYLAL 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20423.5811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0W4_ECTSI1.480e-3383.91ABC transmembrane type-1 domain-containing protein... [more]
A0A7S4DAM6_HETAK5.510e-2463.29Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YSY9_9STRA1.900e-2267.06ABC transporter type 1, transmembrane domain-conta... [more]
W7TKE5_9STRA4.650e-1962.03Atp-binding cassette sub-family b member 9 n=1 Tax... [more]
A0A7S2YRV9_9STRA7.450e-1860.81Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S1CY43_CYCTE1.010e-1756.41Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S2PB77_9STRA1.370e-1758.11Hypothetical protein (Fragment) n=2 Tax=Leptocylin... [more]
A0A7S2KWJ3_9STRA1.380e-1758.11Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2PB08_9STRA1.420e-1758.11Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A1E7FK35_9STRA2.130e-1651.14p-loop containing nucleoside triphosphate hydrolas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 1..88
e-value: 2.2E-21
score: 76.7
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..104
score: 22.589
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 1..109
e-value: 9.8E-29
score: 102.6
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 1..103
IPR030254ATP-binding cassette subfamily B member 9PANTHERPTHR24221:SF242ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 9coord: 5..84
IPR039421Type I protein exporterPANTHERPTHR24221FAMILY NOT NAMEDcoord: 5..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..87
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 87..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20423contigH-elongata_contig20423:2443..4055 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20423.5811.1mRNA_H-elongata_contig20423.5811.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20423 219..4067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20423.5811.1 ID=prot_H-elongata_contig20423.5811.1|Name=mRNA_H-elongata_contig20423.5811.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
MVIVTLLFMFYVSWRLSLVAFISVPAIVIVSKYYGSYIRKLSKLSQDKLA
EAGTVAEESLSSMPTVRSFAAEKRETKEYANTLHHNTALLLLLLHYCRIV
TALILPGTTCYRRKRASRISSTPARTTSCPIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
IPR036640ABC1_TM_sf
IPR030254ABCB9
IPR039421Type_I_exporter