prot_H-elongata_contig20376.5797.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20376.5797.1
Unique Nameprot_H-elongata_contig20376.5797.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length129
Homology
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Match: A0A6H5KW74_9PHAE (Ribokinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KW74_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.530e-43
Identity = 81/136 (59.56%), Postives = 99/136 (72.79%), Query Frame = 0
Query:    1 MASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQICVEDTGGA-------NSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEVILEALERGRAAGMITLFNPAPAQSTLPDR 129
            MA RMG  VAMV C+G+DS+G+ Y++ L  +GIDC  V R    ATGVAQICVE+  G+       N IVIVPGANY LS  DVA+A  +L  A+++MCQ+E+RPE  L ALERGRAAGM T+FNPAPAQ+ LPDR
Sbjct:  104 MARRMGVGVAMVACLGDDSYGTDYVKSLCDDGIDCGSVRRDAGAATGVAQICVEEADGSEGXXXXXNFIVIVPGANYLLSPEDVATATNRLKDAKIIMCQSEVRPEATLAALERGRAAGMTTIFNPAPAQADLPDR 239          
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Match: I2DLY3_9BURK (Ribokinase n=25 Tax=Burkholderia TaxID=32008 RepID=I2DLY3_9BURK)

HSP 1 Score: 107 bits (267), Expect = 1.210e-25
Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    2 ASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQICVEDTGGANSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEVILEALERGRAAGMITLFNPAPAQ 123
            A+R+GA VAM+GC+G D+FG+   + L  E ID + V+R    ATGVA I V D  GANSIV+VPGAN  L    + +A   + GA +M+CQ E+  E ++ A++R RA G   L NPAPA+
Sbjct:   54 AARLGASVAMIGCVGNDAFGARLHDALAAERIDVTHVHRIDGAATGVATITV-DASGANSIVVVPGANARLDAATIDAARDAIAGAALMVCQLEVPMETVVRAIDRARACGTPVLLNPAPAR 174          
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Match: A0A0X8EXU5_PSEFR (Ribokinase n=6 Tax=Pseudomonas TaxID=286 RepID=A0A0X8EXU5_PSEFR)

HSP 1 Score: 105 bits (261), Expect = 8.740e-25
Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 0
Query:    2 ASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQICVEDTGGANSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEVILEALERGRAAGMITLFNPAPAQSTLP 127
            A+R+GA VAMVGC+G D++G    E L  EGIDC  V      A+GVA I V DT   N+IV+VPGAN  L   D+ +    L GA+V++CQ E+  + +   L+RGR    I + NPAPA   LP
Sbjct:   49 AARLGASVAMVGCVGTDAYGVQLREGLEAEGIDCQAVRAVAQGASGVALIVV-DTDSQNTIVVVPGANGCLDAQDIMTVDGMLQGAKVIICQLEVPMDTVGHVLKRGRELDKIVVLNPAPASGPLP 173          
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Match: UPI0005D8309F (PfkB family carbohydrate kinase n=2 Tax=Burkholderia vietnamiensis TaxID=60552 RepID=UPI0005D8309F)

HSP 1 Score: 107 bits (267), Expect = 1.160e-24
Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    2 ASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQICVEDTGGANSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEVILEALERGRAAGMITLFNPAPAQ 123
            A+R+GA VAM+GC+G D+FG+   + L  E ID + V+R    ATGVA I V D  GANSIV+VPGAN  L    + +A   + GA +M+CQ E+  E ++ A++R RA G   L NPAPA+
Sbjct:   54 AARLGASVAMIGCVGNDAFGARLHDALAAERIDLTHVHRIDGAATGVATITV-DASGANSIVVVPGANARLDAATIDAARDAIAGAALMVCQLEVPMETVVRAIDRARACGTPVLLNPAPAR 174          
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Match: A0A553H4U9_9PSED (Ribokinase n=1 Tax=Pseudomonas mangiferae TaxID=2593654 RepID=A0A553H4U9_9PSED)

HSP 1 Score: 104 bits (259), Expect = 1.720e-24
Identity = 56/126 (44.44%), Postives = 78/126 (61.90%), Query Frame = 0
Query:    2 ASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQICVEDTGGANSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEVILEALERGRAAGMITLFNPAPAQSTLP 127
            A+R+GA+VAMVGC+G+D++G+     L  EGIDCS +    D ++GVA I V+D    N+IV++PGAN  LS   V +    L GA++++CQ EI    +   L RG A G   + NPAPA   LP
Sbjct:   49 AARLGARVAMVGCVGDDAYGAQLRTGLEAEGIDCSALAEVADCSSGVALIVVDDNS-QNAIVVIPGANGELSASRVEALDAVLQGAQILICQLEIPSLTVAHVLCRGHALGKTVILNPAPASEALP 173          
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Match: A0A8C4YX78_GADMO (Ribokinase n=3 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4YX78_GADMO)

HSP 1 Score: 104 bits (259), Expect = 1.900e-24
Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    2 ASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQICVEDTGGANSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEVILEALERGRAAGMITLFNPAPAQSTL 126
            A+++GA+ AMVG +G+D FG SY++     G++ +CV++  DVATG A I V D G  N+IVIV GAN  L   ++ ++   L    V++CQ EIRPE  L+AL   R   + T+FNPAPA   L
Sbjct:   52 AAKLGARTAMVGKVGKDFFGDSYIQNFKDNGVNTACVFQAPDVATGAASIVVNDAG-ENAIVIVAGANLLLGAAELQASLPALSRTTVLLCQLEIRPECSLQALRTARQHNVKTIFNPAPAVPDL 175          
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Match: UPI001AAD94DE (ribokinase n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD94DE)

HSP 1 Score: 102 bits (254), Expect = 1.010e-23
Identity = 60/125 (48.00%), Postives = 81/125 (64.80%), Query Frame = 0
Query:    2 ASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQICVEDTGGANSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEVILEALERGRAAGMITLFNPAPAQSTL 126
            A+R+GA+ AMV  +GEDSFGS+Y+E      +    V +    ATG A I V +  G N+IVIV GAN  L + D+A A+  + GARVM+CQ EI P+V LEAL+    +G+ T+FNPAPA + L
Sbjct:   50 AARLGARTAMVCKVGEDSFGSNYIENFRNNDVCTDFVAQTAAAATGAASIIV-NAEGQNAIVIVAGANLLLDSGDLARASEAICGARVMVCQLEISPQVSLEALKMAHNSGVKTIFNPAPAVAVL 173          
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Match: UPI0005AB6EA0 (ribokinase n=1 Tax=Paraburkholderia bannensis TaxID=765414 RepID=UPI0005AB6EA0)

HSP 1 Score: 102 bits (253), Expect = 1.040e-23
Identity = 59/127 (46.46%), Postives = 78/127 (61.42%), Query Frame = 0
Query:    2 ASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQICVEDTGGANSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEVILEALERGRAAGMITLFNPAPAQSTLPD 128
            A+R+GA+VAM+GC+G D+ G      L  EGIDC  +    DV TGVA I V+D    N+IVIV G+N A++   +A     L  A+V++CQ E  P+ +L AL   RA G IT+ NPAPA   LPD
Sbjct:   37 AARLGAQVAMIGCVGADANGERLRAGLLAEGIDCGALDTSPDVPTGVALIVVDDAS-QNAIVIVAGSNGAVTPATLARHEAVLAAAQVVVCQLETPPQAVLAALTTARALGKITILNPAPAIGPLPD 162          
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Match: R1CT03_9FIRM (Ribokinase n=1 Tax=Caldisalinibacter kiritimatiensis TaxID=1304284 RepID=R1CT03_9FIRM)

HSP 1 Score: 102 bits (253), Expect = 1.260e-23
Identity = 48/123 (39.02%), Postives = 85/123 (69.11%), Query Frame = 0
Query:    2 ASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQICVEDTGGANSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEVILEALERGRAAGMITLFNPAPAQS 124
            A+R+GAKV+M+G +G+D FG + ++ +  +GID   + R+++ +TGVA I V D G  NSIV++PGAN+ ++  D+  A   ++G+++++ Q EI  +V+  +L++ +  G  T+ NPAPAQ+
Sbjct:   48 AARLGAKVSMIGKVGDDGFGKNLMDSMNSDGIDTKYIKREENTSTGVALITVNDEGD-NSIVVIPGANFKVTKEDIDKATEAIEGSKIVLLQLEIPIDVVKYSLKKAKTLGKYTILNPAPAQN 169          
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Match: A0A8C5AFX2_GADMO (Ribokinase n=2 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5AFX2_GADMO)

HSP 1 Score: 104 bits (259), Expect = 1.680e-23
Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    2 ASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQICVEDTGGANSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEVILEALERGRAAGMITLFNPAPAQSTL 126
            A+++GA+ AMVG +G+D FG SY++     G++ +CV++  DVATG A I V D G  N+IVIV GAN  L   ++ ++   L    V++CQ EIRPE  L+AL   R   + T+FNPAPA   L
Sbjct:   52 AAKLGARTAMVGKVGKDFFGDSYIQNFKDNGVNTACVFQAPDVATGAASIVVNDAG-ENAIVIVAGANLLLGAAELQASLPALSRTTVLLCQLEIRPECSLQALRTARQHNVKTIFNPAPAVPDL 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20376.5797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW74_9PHAE1.530e-4359.56Ribokinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A... [more]
I2DLY3_9BURK1.210e-2547.54Ribokinase n=25 Tax=Burkholderia TaxID=32008 RepID... [more]
A0A0X8EXU5_PSEFR8.740e-2546.03Ribokinase n=6 Tax=Pseudomonas TaxID=286 RepID=A0A... [more]
UPI0005D8309F1.160e-2447.54PfkB family carbohydrate kinase n=2 Tax=Burkholder... [more]
A0A553H4U9_9PSED1.720e-2444.44Ribokinase n=1 Tax=Pseudomonas mangiferae TaxID=25... [more]
A0A8C4YX78_GADMO1.900e-2444.80Ribokinase n=3 Tax=Gadus morhua TaxID=8049 RepID=A... [more]
UPI001AAD94DE1.010e-2348.00ribokinase n=1 Tax=Rana temporaria TaxID=8407 RepI... [more]
UPI0005AB6EA01.040e-2346.46ribokinase n=1 Tax=Paraburkholderia bannensis TaxI... [more]
R1CT03_9FIRM1.260e-2339.02Ribokinase n=1 Tax=Caldisalinibacter kiritimatiens... [more]
A0A8C5AFX2_GADMO1.680e-2344.80Ribokinase n=2 Tax=Gadus morhua TaxID=8049 RepID=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029056Ribokinase-likeGENE3D3.40.1190.20coord: 1..129
e-value: 2.8E-36
score: 127.3
IPR029056Ribokinase-likeSUPERFAMILY53613Ribokinase-likecoord: 2..123
IPR011611Carbohydrate kinase PfkBPFAMPF00294PfkBcoord: 2..123
e-value: 6.1E-15
score: 55.3
NoneNo IPR availablePANTHERPTHR10584SUGAR KINASEcoord: 2..127
NoneNo IPR availablePANTHERPTHR10584:SF166RIBOKINASEcoord: 2..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20376contigH-elongata_contig20376:5977..6521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20376.5797.1mRNA_H-elongata_contig20376.5797.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20376 5968..6521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20376.5797.1 ID=prot_H-elongata_contig20376.5797.1|Name=mRNA_H-elongata_contig20376.5797.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp
MASRMGAKVAMVGCMGEDSFGSSYLERLGVEGIDCSCVYRKQDVATGVAQ
ICVEDTGGANSIVIVPGANYALSTMDVASAARKLDGARVMMCQAEIRPEV
ILEALERGRAAGMITLFNPAPAQSTLPDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029056Ribokinase-like
IPR011611PfkB_dom