prot_H-elongata_contig20375.5796.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20375.5796.1
Unique Nameprot_H-elongata_contig20375.5796.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20375.5796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..136
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..84
NoneNo IPR availableTMHMMTMhelixcoord: 44..63
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 67..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20375contigH-elongata_contig20375:456..5798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20375.5796.1mRNA_H-elongata_contig20375.5796.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20375 387..6917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20375.5796.1 ID=prot_H-elongata_contig20375.5796.1|Name=mRNA_H-elongata_contig20375.5796.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
MDHAAEPVTIVTAADQALAVNAEGENHCCGVPPTASTQVKATRMASVMII
VIHVIALFFGTIFWGQWVASLIAIVMGSIVLCHFNKYAYNAAAFLFLVAI
TFDVLSCYFWIMFAENSTDDGTDDDISEDETERTTKLFLISPAIGAVCLF
LGAIAAFTATCTWEKNRRGSPETP*
back to top