prot_H-elongata_contig20361.5791.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig20361.5791.1
Unique Name	prot_H-elongata_contig20361.5791.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	232

Homology

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BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Match: D8LF79_ECTSI (Glutamate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF79_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 5.110e-82
Identity = 136/176 (77.27%), Postives = 151/176 (85.80%), Query Frame = 0

Query:    1 MIKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYRLIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGANWSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCSVICSSFEIVSSMLKTSEHGQQDRNCV 176
            MIKIL+REYG+ACLIVGVADGTGSAEDPEGL H ELLRLF +GLPI+ YR  K      GV+HTCD +EGIRARNTMHNRVKADAFVPAGGRPGTING+NW S+LD D  PSS LVV+GANLFTTPEARE LFKEAGVVFVKDSSANKC VICSSFEI+SSML TSE  ++++  +
Sbjct:  747 MIKILNREYGDACLIVGVADGTGSAEDPEGLSHAELLRLFEEGLPISAYRFNKF--GPKGVLHTCDNDEGIRARNTMHNRVKADAFVPAGGRPGTINGSNWRSYLDSDGTPSSTLVVEGANLFTTPEAREALFKEAGVVFVKDSSANKCGVICSSFEIISSMLMTSEEFKENKEGI 920

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BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Match: A0A2P4X629_9STRA (NAD-specific glutamate dehydrogenase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X629_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.030e-59
Identity = 103/163 (63.19%), Postives = 121/163 (74.23%), Query Frame = 0

Query:    1 MIKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYRLIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGANWSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCSVICSSFEIVSSML 163
            +IKIL REYG    +VG+ DGTG  EDP+GL   ELLRL  + LP++ +   KV  + TGV H     EGIRARNTMHNRVK+D F+PAGGRP TIN  NW  +LD D  PSS L+V+GANLF TPEAR+LLF  AGVV VKDSSANKC V+CSS+EIV+SML
Sbjct:  186 VIKILHREYGSNLRVVGICDGTGVIEDPQGLDMGELLRLVDESLPLSSFDESKVSAA-TGVKHDISTAEGIRARNTMHNRVKSDLFIPAGGRPNTINENNWQEYLDADGKPSSGLIVEGANLFVTPEARQLLFDNAGVVIVKDSSANKCGVVCSSYEIVASML 347

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BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Match: A0A7S2PQU8_9STRA (Glutamate dehydrogenase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQU8_9STRA)

HSP 1 Score: 206 bits (525), Expect = 8.970e-58
Identity = 102/166 (61.45%), Postives = 127/166 (76.51%), Query Frame = 0

Query:    2 IKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYRLIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGANWSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCSVICSSFEIVSSMLKTSE 167
            +KIL REYG+   +VG+ADGTG AEDP GL  +ELLRL  D LPI ++   K+     G VHT D EEG++ARN+MHNRV+ADAF+PAGGRP TIN  N+  FL+ D  PS+PL+V+GANLF T EAR+LLF+EAGVV VKDSSANKC VI SS+EI ++M+ + E
Sbjct:  734 LKILAREYGDNAKVVGIADGTGCAEDPNGLAWDELLRLVNDNLPIDQFNPSKL--GECGAVHTVDTEEGVKARNSMHNRVQADAFIPAGGRPNTINIHNYKHFLNHDGSPSAPLIVEGANLFVTDEARQLLFEEAGVVIVKDSSANKCGVITSSYEICAAMMLSEE 897

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BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Match: A0A0W8DM33_PHYNI (Ankyrin repeat n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DM33_PHYNI)

HSP 1 Score: 206 bits (524), Expect = 1.560e-57
Identity = 104/163 (63.80%), Postives = 122/163 (74.85%), Query Frame = 0

Query:    1 MIKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYRLIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGANWSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCSVICSSFEIVSSML 163
            +IKIL REYG    +VG+ DGTG  EDP+GL   ELLRL  + LP++ +   K+ TS TGV H     EGIRARNTMHNRVK+D F+PAGGRP TIN  NW  +LD D  PSS L+V+GANLF TPEAR+LLF  AGVV VKDSSANKC V+CSS+EIV+SML
Sbjct:  708 VIKILHREYGTNLRVVGICDGTGVIEDPQGLDMGELLRLVDESLPLSSFDDSKI-TSATGVKHDISTAEGIRARNTMHNRVKSDLFIPAGGRPNTINENNWQDYLDADGKPSSGLIVEGANLFVTPEARQLLFDNAGVVIVKDSSANKCGVVCSSYEIVASML 869

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BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Match: A0A0P1A691_PLAHL (Nad-specific glutamate n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A691_PLAHL)

HSP 1 Score: 203 bits (517), Expect = 1.660e-57
Identity = 102/163 (62.58%), Postives = 122/163 (74.85%), Query Frame = 0

Query:    1 MIKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYRLIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGANWSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCSVICSSFEIVSSML 163
            +IKIL REYG    +VG+ DGTG  EDP+GL   ELLRL  + LP++ +   K+ +S TGV +     EGIRARNT+HNRVK+D F+PAGGRP TIN  NW  FLD D  PSS L+V+GANLF TPEAR+LLF  AGVV VKDSSANKC V+CSS+EIV+SML
Sbjct:  396 VIKILHREYGNNLRVVGICDGTGVVEDPQGLDMGELLRLVNESLPLSSFDSSKI-SSTTGVKYDIATTEGIRARNTLHNRVKSDLFIPAGGRPNTINENNWRDFLDTDGKPSSGLIVEGANLFVTPEARQLLFDNAGVVIVKDSSANKCGVVCSSYEIVASML 557

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BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Match: A0A662WIM8_9STRA (ELFV_dehydrog domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIM8_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.140e-57
Identity = 101/163 (61.96%), Postives = 125/163 (76.69%), Query Frame = 0

Query:    1 MIKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYRLIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGANWSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCSVICSSFEIVSSML 163
            +IKIL R+YG+   IVG+ DGTG  EDP+GL  +ELLRL ++ LP++ +   KV +S TGV H  +  EG+RARN+MHNRVK+D F+PAGGRP TIN  NW  +LD D  PSS L+V+GANLF TPEAR+LLF   GVV VKDSSANKC V+CSS+EIV+SML
Sbjct:  713 VIKILHRQYGDNLRIVGICDGTGVIEDPQGLDMQELLRLVHESLPLSSFDETKV-SSATGVKHDINTPEGVRARNSMHNRVKSDLFIPAGGRPNTINENNWRDYLDADGKPSSGLIVEGANLFITPEARQLLFDNGGVVIVKDSSANKCGVVCSSYEIVASML 874

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BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Match: B8BVC6_THAPS (Glutamate dehydrogenase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVC6_THAPS)

HSP 1 Score: 200 bits (509), Expect = 2.300e-57
Identity = 100/166 (60.24%), Postives = 126/166 (75.90%), Query Frame = 0

Query:    2 IKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYRLIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGANWSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCSVICSSFEIVSSMLKTSE 167
            +KIL+REYG+   +VG+ADGTGSAEDP GL  +ELLRL ++ LPI  +   K+     G VH  D EEG++ARN+MHNRV+ADAF+PAGGRP TIN  N+  FL+ D  PS+PL+V+GANLF T EAR+LLF EAGV+ VKDSSANK  VI SS+EI ++ML + E
Sbjct:  239 LKILNREYGDNAKVVGIADGTGSAEDPNGLDWDELLRLVHNNLPIDNFDTSKL--GEGGAVHKVDTEEGVKARNSMHNRVQADAFLPAGGRPNTINVHNYKHFLNTDGSPSAPLIVEGANLFVTDEARQLLFDEAGVIIVKDSSANKAGVITSSYEICAAMLLSEE 402

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BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Match: A0A6G0WTV4_9STRA (ELFV_dehydrog domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTV4_9STRA)

HSP 1 Score: 194 bits (494), Expect = 4.360e-57
Identity = 97/163 (59.51%), Postives = 118/163 (72.39%), Query Frame = 0

Query:    1 MIKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYRLIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGANWSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCSVICSSFEIVSSML 163
            +IKIL REYG    +VG+ DGT S ++ EG+   ELLRL  + LP++ +   K   +H G  H  D   G+RARNT+HNRVK+D F+PAGGRP TIN  NW  +LD +   SSPL+V+GANLF TPEAR+LLF  AGVV VKDSSANKC VICSS+EIVSSML
Sbjct:   36 IIKILAREYGSNVKVVGICDGTASIDNEEGIDMGELLRLVEESLPLSSFNPAK---THGGNFHLADTPAGVRARNTLHNRVKSDLFIPAGGRPNTINENNWRDYLDANGKASSPLIVEGANLFVTPEARQLLFDNAGVVIVKDSSANKCGVICSSYEIVSSML 195

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BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Match: H3GFR4_PHYRM (ELFV_dehydrog domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3GFR4_PHYRM)

HSP 1 Score: 205 bits (521), Expect = 4.720e-57
Identity = 102/163 (62.58%), Postives = 122/163 (74.85%), Query Frame = 0

Query:    1 MIKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYRLIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGANWSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCSVICSSFEIVSSML 163
            +IKIL REYG    +VG+ DGTG  EDP+GL   ELLRL  + LP++ +   KV +  TGV H    +EGIRARNT+HNRVK+D F+PAGGRP TIN  NW  +LD D  PSS L+V+GANLF TPEAR+LLF  AGVV VKDSSANKC V+CSS+EIV+SML
Sbjct:  802 VIKILHREYGSNLRVVGICDGTGVIEDPQGLDMPELLRLVDEELPLSSFNETKVAS--TGVKHDISTQEGIRARNTLHNRVKSDLFIPAGGRPNTINENNWRDYLDADGKPSSSLIVEGANLFITPEARQLLFDNAGVVIVKDSSANKCGVVCSSYEIVASML 962

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BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Match: A0A2D4BYU6_PYTIN (Poly [ADP-ribose] polymerase (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYU6_PYTIN)

HSP 1 Score: 204 bits (519), Expect = 9.930e-57
Identity = 101/167 (60.48%), Postives = 123/167 (73.65%), Query Frame = 0

Query:    1 MIKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYRLIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGANWSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCSVICSSFEIVSSMLKTSE 167
            +IKIL REYG    +VG+ DGTG  E+PEGL   ELLRL  + LP++EY   ++     G+ H  D  EG+RARN+MHNRVK+D F+PAGGRP TIN  NWS +LD +  PS  L+V+GANLF TPEAR+LLF  AGVV VKDSSANKC VICSS+EI+SSML  +E
Sbjct:  732 IIKILFREYGSNVKVVGICDGTGVVENPEGLSQSELLRLVEESLPLSEYNPSELGAK--GIFHGVDTPEGVRARNSMHNRVKSDLFIPAGGRPNTINENNWSDYLDAEGKPSCKLIVEGANLFITPEARQLLFDNAGVVIVKDSSANKCGVICSSYEIISSMLLETE 896

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot

BLAST of mRNA_H-elongata_contig20361.5791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LF79_ECTSI	5.110e-82	77.27	Glutamate dehydrogenase n=1 Tax=Ectocarpus silicul...	[more]
A0A2P4X629_9STRA	2.030e-59	63.19	NAD-specific glutamate dehydrogenase n=1 Tax=Phyto...	[more]
A0A7S2PQU8_9STRA	8.970e-58	61.45	Glutamate dehydrogenase (Fragment) n=1 Tax=Skeleto...	[more]
A0A0W8DM33_PHYNI	1.560e-57	63.80	Ankyrin repeat n=1 Tax=Phytophthora nicotianae Tax...	[more]
A0A0P1A691_PLAHL	1.660e-57	62.58	Nad-specific glutamate n=1 Tax=Plasmopara halstedi...	[more]
A0A662WIM8_9STRA	2.140e-57	61.96	ELFV_dehydrog domain-containing protein n=1 Tax=No...	[more]
B8BVC6_THAPS	2.300e-57	60.24	Glutamate dehydrogenase n=1 Tax=Thalassiosira pseu...	[more]
A0A6G0WTV4_9STRA	4.360e-57	59.51	ELFV_dehydrog domain-containing protein n=1 Tax=Ap...	[more]
H3GFR4_PHYRM	4.720e-57	62.58	ELFV_dehydrog domain-containing protein n=21 Tax=P...	[more]
A0A2D4BYU6_PYTIN	9.930e-57	60.48	Poly [ADP-ribose] polymerase (Fragment) n=2 Tax=Py...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006096	Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal	SMART	SM00839	ELFV_dehydrog_3	coord: 2..184 e-value: 0.0019 score: -25.2
IPR006096	Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal	PFAM	PF00208	ELFV_dehydrog	coord: 15..164 e-value: 3.2E-21 score: 76.2
None	No IPR available	GENE3D	3.40.50.720		coord: 1..192 e-value: 3.3E-32 score: 114.1
None	No IPR available	PANTHER	PTHR11606	GLUTAMATE DEHYDROGENASE	coord: 2..166
None	No IPR available	PANTHER	PTHR11606:SF26		coord: 2..166
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 12..164

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig20361	contig	H-elongata_contig20361:4955..6166 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig20361.5791.1	mRNA_H-elongata_contig20361.5791.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig20361 4928..6521 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig20361.5791.1 ID=prot_H-elongata_contig20361.5791.1|Name=mRNA_H-elongata_contig20361.5791.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
MIKILDREYGEACLIVGVADGTGSAEDPEGLCHEELLRLFYDGLPITEYR
LIKVCTSHTGVVHTCDKEEGIRARNTMHNRVKADAFVPAGGRPGTINGAN
WSSFLDDDSMPSSPLVVQGANLFTTPEARELLFKEAGVVFVKDSSANKCS
VICSSFEIVSSMLKTSEHGQQDRNCVPSVGSAKGRRPSRGGASLPRAPQP
SHYAPTTHQQAHQPCDQFRHRCRTQDSRRHH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006096	Glu/Leu/Phe/Val_DH_C
IPR036291	NAD(P)-bd_dom_sf