prot_H-elongata_contig2035.5779.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig2035.5779.1
Unique Nameprot_H-elongata_contig2035.5779.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.490e-27
Identity = 63/90 (70.00%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASENVNMIMFLNGNQESIPVEVPLLSEVQAQEAVPRRLTNPKTEMVALSTDVKYVIPD 90
            ARVLLSVPAS+AVLERDFSTAG+LITG+RSRL++  V M++FLNGNQE IP+EVP LS+ Q QEAVPRRL+NP  E   LS  V  V+PD
Sbjct:  731 ARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQGQEAVPRRLSNPNEETERLS--VGEVVPD 818          
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.020e-14
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0
Query:    1 ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASENVNMIMFLNGNQESIPVEVPLLSEVQAQEAVPRRLTNP 73
            ARV+   PASAAVLERDFS AG+++T SRS + S+ V MIMFL+GN + IP ++  L+E  A+  +P RL NP
Sbjct:  625 ARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRLANP 697          
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.320e-13
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    1 ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASEN-VNMIMFLNGNQESIPVEVPLLSEVQAQEAVPRRLTNP 73
            ARV+   PASAAVLERDFS AG+++T SR  + S   V MI+FL+GN + IP ++  L+E  A+  +P RL NP
Sbjct:   13 ARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVARSKIPGRLANP 86          
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 6.240e-11
Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    1 ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASENVNMIMFLNGNQESIPVEVPLLSEVQAQEAVPRRLTNPKTEMVAL 80
            ARV+   PASAAVLERDF+ A  ++  SRS   ++ V M++FL+GN + IP ++P L +   Q  +P RL+NP  E+  L
Sbjct:  565 ARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNPIPELHGL 644          
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Match: A0A225UGF7_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UGF7_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.520e-9
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    1 ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASENVNMIMFLNGNQESIPV-EVPLLSEVQAQEAVPRRLTNPKTEMV 78
            ARVL S+P+S+A +ERDF TAG+++T  RS LA  NV+M  FLN N+  + + + P LS   A E   RR +N   +MV
Sbjct:   43 ARVLFSIPSSSAQIERDFGTAGRMVTSQRSSLAPCNVDMTTFLNCNRTYVDITQCPKLSPNTADE---RRPSNVMVQMV 118          
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Match: H3GTQ6_PHYRM (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTQ6_PHYRM)

HSP 1 Score: 58.9 bits (141), Expect = 4.250e-9
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASENVNMIMFLNGNQESIPV-EVPLLSEVQAQEAVP 67
            ARV+ S+P+S+A +ERDF TAG+++T  R+ LAS NV+M  FLN N+  + + + P +S   A E VP
Sbjct:   11 ARVVFSLPSSSAQIERDFGTAGRMVTPQRNSLASHNVDMTTFLNCNRCYVNIAQCPKVSAAAASERVP 78          
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.620e-9
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 0
Query:    1 ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASENVNMIMFLNGNQESIPVEVPLLSEVQAQEAVPRRLTN 72
            ARV+   PASAAVLE DF  AG+++T SRS   ++ V MI+FL+GN + IP ++P         A   RLTN
Sbjct:   55 ARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIPACQPT----APSARLTN 122          
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Match: A0A662XG42_9STRA (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XG42_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 7.500e-8
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    1 ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASENVNMIMFLNGNQESIPV-EVPLLSEVQAQEAVP 67
            ARVL S+P+S+A +ERDF TAG+++T  RS LA  NV+M  FL+ N   + + + P LS+  A E +P
Sbjct:  152 ARVLFSMPSSSAQIERDFGTAGRMVTPQRSSLAPYNVDMATFLSCNTSYVDITQCPKLSQSTATERLP 219          
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Match: A0A662XSL6_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSL6_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.370e-7
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    1 ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASENVNMIMFLNGNQESIPV-EVPLLSEVQAQEAVP 67
            ARVL S P+S+A +ERDF TAG+++T  RS LA  NV+M  FL+ N+  + + + P LS+  A E +P
Sbjct:  233 ARVLFSKPSSSAQIERDFGTAGRMVTPQRSSLAPYNVDMATFLSCNRSYVDITQCPKLSQSTATERLP 300          
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Match: A0A662WKZ2_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKZ2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 7.270e-7
Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASENVNMIMFLNGNQESIPV-EVPLLSEVQAQEAVPRRL 70
            ARV+ S+PAS+A +ERDF  AGQ++   RS LA  N++M  FLN N++   + + P LS   A E +P  +
Sbjct:  620 ARVVYSMPASSAQIERDFGMAGQMVVPHRSSLAPYNIDMSTFLNCNRDYCNITQCPKLSAETASERIPSNM 690          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig2035.5779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5KVU5_9PHAE1.490e-2770.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ82_9PHAE1.020e-1454.79Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KCJ3_9PHAE1.320e-1351.35Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LBK4_ECTSI6.240e-1145.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A225UGF7_9STRA2.520e-946.84Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ph... [more]
H3GTQ6_PHYRM4.250e-947.06Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ph... [more]
A0A6H5L5L6_9PHAE4.620e-947.22Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A662XG42_9STRA7.500e-847.06Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
A0A662XSL6_9STRA1.370e-747.06Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]
A0A662WKZ2_9STRA7.270e-743.66Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 1..46
e-value: 1.0E-9
score: 38.0
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig2035contigH-elongata_contig2035:8942..9220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig2035.5779.1mRNA_H-elongata_contig2035.5779.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig2035 8942..9220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig2035.5779.1 ID=prot_H-elongata_contig2035.5779.1|Name=mRNA_H-elongata_contig2035.5779.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
ARVLLSVPASAAVLERDFSTAGQLITGSRSRLASENVNMIMFLNGNQESI
PVEVPLLSEVQAQEAVPRRLTNPKTEMVALSTDVKYVIPDVFN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf