prot_H-elongata_contig20321.5769.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20321.5769.1
Unique Nameprot_H-elongata_contig20321.5769.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length273
Homology
BLAST of mRNA_H-elongata_contig20321.5769.1 vs. uniprot
Match: A0A6H5JPP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP0_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.410e-57
Identity = 134/294 (45.58%), Postives = 168/294 (57.14%), Query Frame = 0
Query:    1 MFGRELAKRGFEQESWNYLTGSAAPWNRQIYQVRAAMSIPAVPSSQEDLDIAISSLEGAIERLLPEADT----SRCGTLGRGGLAERKGSCGVGNASSEARPLSACSFGGLNYPDVALDDLPLLAFADQRFRRRSYG----ERAGARDT--GGGGSREGHQSSPPSSGKGPNEVAAEAGAXXXXXXXXXXXXXXXGT-----------SPYGAIARLFSRLCPDLVGFVSPWLKAFAGGEGMAPREFQKGGQFGEAGRDGRVSVMFVSSRFCNHGTTKNIAGLMRLLPRDFFEV 273
            M GREL+KRGF++ESW+YLT +AAPWNRQIY++R+A+SIP V SS++DL +A+++LEG + R  P  +     +R             G            PLS+CSFG LNYPDVA D LPLLAFAD R+ RR+ G    + AG+R +  GGGG+ +G +      G  P  V+ E                  G            S YG+I RLF RLCPDL  FV+PWL  + G   +AP     GG  GEA  DGRV V FVSSRF NH TTK +A LMRLLPR  FE+
Sbjct:  395 MLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMATLEGWLRRQEPLVEDPPQPARXXXXXXXXXXXXXGDFET--------PLSSCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGLEADDAGSRRSPEGGGGTGDGDKDE----GVPPRGVSGEVDGDAWRMPGLVGRSAGKGLDENGGDDADRLSLYGSIGRLFWRLCPDLGAFVAPWLDRYGGASSLAPEA--DGGLRGEA--DGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEI 672          
BLAST of mRNA_H-elongata_contig20321.5769.1 vs. uniprot
Match: D8LAX0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX0_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 8.820e-57
Identity = 134/286 (46.85%), Postives = 160/286 (55.94%), Query Frame = 0
Query:    1 MFGRELAKRGFEQESWNYLTGSAAPWNRQIYQVRAAMSIPAVPSSQEDLDIAISSLEGAIERLLPEADTSRCGTLGRGGLAERKGSCGVGNASSEARPLSACSFGGLNYPDVALDDLPLLAFADQRFRRRSYG--ERAGA----RDTGGGGSREGHQSSPPSSGKGPNEVAAEA-------GAXXXXXXXXXXXXXXXGTSPYGAIARLFSRLCPDLVGFVSPWLKAFAGGEGMAPREFQKGGQFGEAGRDGRVSVMFVSSRFCNHGTTKNIAGLMRLLPRDFFEV 273
            M GREL+KRGF++ESW+YLT +AAPWNRQIY++R+A+SIP V SS++DL +A+++LEG + R  P                             E  PLS CSFG LNYPDVA D LPLLAFAD R+ RR+ G  E   A       GGGG ++  +  PP    G  EV  +A       G                  S YG I RLF RLCPDL  FV+PWL  + G   +AP     GG  GEA  DGRV V FVSSRF NH TTK +A LMRLLPR  FEV
Sbjct:  151 MLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMAALEGWLRRQEPXXXXXXXXXXXXXXXXXXXXXXXXXXXDFET-PLSTCSFGALNYPDVAFDSLPLLAFADHRYPRRNRGGFEAVDADYRRSPAGGGGDKD--EGVPPRGVSG--EVDGDAWRKPGLAGRSAWKGLDENGEDDADRMSLYGPIGRLFGRLCPDLGAFVAPWLDRYGGASSLAPEA--DGGLRGEA--DGRVRVAFVSSRFGNHATTKALAALMRLLPRQHFEV 427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20321.5769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPP0_9PHAE1.410e-5745.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAX0_ECTSI8.820e-5746.85TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20321contigH-elongata_contig20321:4475..6446 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20321.5769.1mRNA_H-elongata_contig20321.5769.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20321 4464..6446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20321.5769.1 ID=prot_H-elongata_contig20321.5769.1|Name=mRNA_H-elongata_contig20321.5769.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=273bp
MFGRELAKRGFEQESWNYLTGSAAPWNRQIYQVRAAMSIPAVPSSQEDLD
IAISSLEGAIERLLPEADTSRCGTLGRGGLAERKGSCGVGNASSEARPLS
ACSFGGLNYPDVALDDLPLLAFADQRFRRRSYGERAGARDTGGGGSREGH
QSSPPSSGKGPNEVAAEAGAGDGSGEAPRGDGDTDGTSPYGAIARLFSRL
CPDLVGFVSPWLKAFAGGEGMAPREFQKGGQFGEAGRDGRVSVMFVSSRF
CNHGTTKNIAGLMRLLPRDFFEV
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