prot_H-elongata_contig202466.5734.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig202466.5734.1
Unique Nameprot_H-elongata_contig202466.5734.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length337
Homology
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 4.020e-52
Identity = 133/352 (37.78%), Postives = 180/352 (51.14%), Query Frame = 0
Query:    1 CQKTGHIRPNCPERQCFKCRGWDHEANSCPSKIKTKEEATVMAVKQEPDFEVSTMAIEVEKNVPPVGELPLE-------STVE-----RWITDSGCSRFMTPSADYMVNYREGKGVVRIADGRVMPIEGIGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMADRGHKYVG-DKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSGEFALATIAPG--KIPSVSPVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTLRECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCMLVISDDFSRFTWTYFMRQKSDTVALFEQFLADERVAG 337
            C K GH   NCPE +    R                EEA ++             A++V +    VG++  E         VE     R++ D+G +  M  ++D  V Y E    VR+A G   PI G G++ ++  S       +L  VAHVP L YNL+SL  + D G +    +K  + L    G+ ++    G L   +GFR      E A A IAPG  K PS +PVDIN FH +HG  HE LLR+TA+Q G  L G LREC GCS AKGL KPI   TSTRA K   R+FVD+ G+  V S+GGK   L++ DD++R+   YF++ KSD    FE++LA+ R  G
Sbjct:  282 CGKKGHQVANCPESKPV--RXXXXXXXXXXXXXXXTEEAVLVVEVPAGRASADATALDVAEEALVVGDISGECHKVVGRGGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHT---EHACAAIAPGNAKAPS-TPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANG 627          
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 4.060e-52
Identity = 133/352 (37.78%), Postives = 180/352 (51.14%), Query Frame = 0
Query:    1 CQKTGHIRPNCPERQCFKCRGWDHEANSCPSKIKTKEEATVMAVKQEPDFEVSTMAIEVEKNVPPVGELPLE-------STVE-----RWITDSGCSRFMTPSADYMVNYREGKGVVRIADGRVMPIEGIGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMADRGHKYVG-DKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSGEFALATIAPG--KIPSVSPVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTLRECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCMLVISDDFSRFTWTYFMRQKSDTVALFEQFLADERVAG 337
            C K GH   NCPE +    R                EEA ++             A++V +    VG++  E         VE     R++ D+G +  M  ++D  V Y E    VR+A G   PI G G++ ++  S       +L  VAHVP L YNL+SL  + D G +    +K  + L    G+ ++    G L   +GFR      E A A IAPG  K PS +PVDIN FH +HG  HE LLR+TA+Q G  L G LREC GCS AKGL KPI   TSTRA K   R+FVD+ G+  V S+GGK   L++ DD++R+   YF++ KSD    FE++LA+ R  G
Sbjct:  295 CGKKGHQVANCPESKPV--RXXXXXXXXXXXXXXXTEEAVLVVEVPAGRASADATALDVAEEALVVGDISGECHKVVGRGGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHT---EHACAAIAPGNAKAPS-TPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANG 640          
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 4.090e-52
Identity = 133/352 (37.78%), Postives = 180/352 (51.14%), Query Frame = 0
Query:    1 CQKTGHIRPNCPERQCFKCRGWDHEANSCPSKIKTKEEATVMAVKQEPDFEVSTMAIEVEKNVPPVGELPLE-------STVE-----RWITDSGCSRFMTPSADYMVNYREGKGVVRIADGRVMPIEGIGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMADRGHKYVG-DKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSGEFALATIAPG--KIPSVSPVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTLRECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCMLVISDDFSRFTWTYFMRQKSDTVALFEQFLADERVAG 337
            C K GH   NCPE +    R                EEA ++             A++V +    VG++  E         VE     R++ D+G +  M  ++D  V Y E    VR+A G   PI G G++ ++  S       +L  VAHVP L YNL+SL  + D G +    +K  + L    G+ ++    G L   +GFR      E A A IAPG  K PS +PVDIN FH +HG  HE LLR+TA+Q G  L G LREC GCS AKGL KPI   TSTRA K   R+FVD+ G+  V S+GGK   L++ DD++R+   YF++ KSD    FE++LA+ R  G
Sbjct:  438 CGKKGHQVANCPESKPV--RXXXXXXXXXXXXXXXTEEAVLVVEVPAGRASADATALDVAEEALVVGDISGECHKVVGRGGVEQARRGRYVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHT---EHACAAIAPGNAKAPS-TPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANG 783          
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Match: A0A6H5L8P7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P7_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.070e-48
Identity = 111/259 (42.86%), Postives = 148/259 (57.14%), Query Frame = 0
Query:   81 DSGCSRFMTPSADYMVNYREGKGVVRIADGRVMPIEGIGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMADRGHKYVGDKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSGEFALATIAPG--KIPSVSPVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTLRECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCMLVISDDFSRFTWTYFMRQKSDTVALFEQFLADERVAG 337
            D+G +  M  ++D  V Y E    VR+A G   PI G G++ ++  S       +L  VAHVP L YNL+SL  + D G +     K  +   + G+++       L   +GFR      E A A IAPG  K PS +PVDIN FH +HG  HE LLR+TA+Q G  L G LREC GCS AKGL KPI   TSTRA K   R+FVD+ G+  V S+GGK   L++ DD++R+   YF++ KSD    FE++LA+ R  G
Sbjct:  192 DTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKYDLELERGGESVRFPRYSNLYVQNGFRTHT---EHACAAIAPGNAKAPS-TPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANG 446          
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 2.640e-44
Identity = 105/263 (39.92%), Postives = 146/263 (55.51%), Query Frame = 0
Query:   77 RWITDSGCSRFMTPSADYMVNYREGKGVVRIADGRVMPIEGIGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMADRGHKYVG-DKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSGEFALATIAPGKIPSVS-PVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTLRECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCMLVISDDFSRFTWTYFMRQKSDTVALFEQFLADERVAG 337
            R + D+G +  M  ++D  V Y E    VR+A G   PI G G++ ++  S       +L  VAHVP L YNL+SL  + D G +    +K  + L    G++++    G L   +G R      E A   IAPG   + S PV+IN FH +HG  HE LLR+TA+Q G  L G LREC GCS AKGL K I   TSTRA K   R+F+D+ G+  V S+ GK   L++ D ++R+   YF++ KSD    FE++LA+ R  G
Sbjct:  394 RCVADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRGGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFQTKTLNKHELELERGGGESVYSPRCGNLYVHNGCRTHT---EHAYTAIAPGDAKASSAPVEINDFHYAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANG 653          
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Match: A0A6H5JW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW24_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 4.190e-41
Identity = 125/356 (35.11%), Postives = 176/356 (49.44%), Query Frame = 0
Query:    1 CQKTGHIRPNCPERQ---CFKCRGWDHEANSCPSKIKTKEEATVMAVKQEPDFEVSTMAIEVEKNVPPVGELPLE-------STVE-----RWITDSGCSRFMTPSADYMVNYREGKGVVRIADGRVM-PIEGIGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMADRGHKYVG-DKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSGEFALATIAPG--KIPSVSPVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTLRECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCMLVISDDFSRFTWTYFMRQKSDTVALFEQFLADERVAG 337
            C K GH   +C E +   C  C+G+ H+ + CP+     E A ++             A++V +    VG++  E         VE     R++ D+G +  M  ++D  V + E    VR+A G    PI G G++ M+  S       +L  VAHVP + YNL+    + D G +    +K  + L    G+ ++    G L   +GFR      E + A IAPG  K PS +PVDIN FH +HG  HE LLR+TA+Q G  L G LREC GCS AKG+ KPI   TSTRA K   R+FVD+ G KS+    G  C+             YF++ KSD    FE++LA+ R  G
Sbjct:  383 CGKKGHQVADCTESKPVRCETCKGYGHDKSKCPT-----EGAVLVVEAPAGGASADATALDVAEEALVVGDISGECHKVVGRGGVEQARRGRYVADTGATTHMFANSDGFVRFEECDRRVRVAAGETFFPIVGYGDVRMTLSSRDCTTDLLLKRVAHVPRVYYNLVPRTSLFDDGSETKTLNKNELELERGGGEGVYFPRCGNLYVQNGFRTHT---EHSHAAIAPGNAKAPS-APVDINDFHCAHGHSHEVLLRTTAKQQGTKLVGELRECLGCSTAKGISKPIPNKTSTRAAKKLQRVFVDLSG-KSI----GWNCV-------------YFLKHKSDAAEAFERYLAENRAHG 711          
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 6.450e-40
Identity = 93/197 (47.21%), Postives = 121/197 (61.42%), Query Frame = 0
Query:  144 LLGYNLLSLKMMADRGHKYVG-DKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSGEFALATIAPG--KIPSVSPVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTLRECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCMLVISDDFSRFTWTYFMRQKSDTVALFEQFLADERVAG 337
            L+ YNL+SL  + D G +    DK  + L  + G+ ++    GKL   +GFR      E A A IAPG  K PS +PVDIN FH +HG  HE LLR+TA+Q G  L G LREC GCS AKGL KPI   TSTRA K   R+FVD+ G+  V S+GGK   L++ DD++R+   YF++ KSD    FE++LA+ R  G
Sbjct:  241 LVAYNLVSLTSLFDDGFETKTLDKHELELDRRGGEVVYFPRCGKLYVQNGFRTHT---EHACAAIAPGNAKAPS-TPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANG 433          
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 1.570e-38
Identity = 97/264 (36.74%), Postives = 130/264 (49.24%), Query Frame = 0
Query:   75 VERWITDSGCSRFMTPSADYMVNYREGKGVVRIADGRVMPIEGIGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMAD-RGHKYVGDKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSGEFALATIAPGKIPSVSPVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTLRECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCMLVISDDFSRFTWTYFMRQKSDTVALFEQFLADERVAG 337
            VE W  D+G +  MT     M + +     V+   G    IE  G L + F +        L NV + P LGYNL S     D     Y+G   GVM    NG   F    G L     +R   +     LA + P      S +D+N FH  +   HE LLR+TA++LG+ L G +  C GCS++K   K I   T  R+DK  GR+FVD+ G K VAS+GGK   +++ DDF+R TW YF++ KSD  + F  FLA  R  G
Sbjct:  428 VEDWYADTGTAFHMTDRLSCMKDLKPCHKNVKGIGGVTCEIEFSGTLELVFVTADSQFPVELENVLYSPNLGYNLFSPSAEFDGESWNYLGGPDGVMTAF-NGHVTFQNLDGML-ISPAYRLENNCVGSVLAALTPSNPKHESKMDVNEFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADG 689          
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Match: A0A6H5KSX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSX8_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 3.090e-37
Identity = 96/222 (43.24%), Postives = 126/222 (56.76%), Query Frame = 0
Query:   88 MTPSADYMVNYREGKGVVRIADGRVMPIEGIGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMADRGHKYVG-DKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSGEFALATIAPG--KIPSVSPVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTLRECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCMLVISDD 306
            M  ++D  V Y+E    VR+A G   P+ G G++ ++  S       IL  VA+V     NL+ L  + D G K    DK  + L  + G++++    G L   +GFR      E A A IAPG  K PS +PVDIN FH +HG  HE LLR+TA+Q G  L G LREC GCS AKGL KPI   TSTRA K   R+FVD+ G+  V S+GGK C+ V+ D+
Sbjct:    1 MFANSDGFVRYQECDRRVRVAAGETFPVVGYGDVTVTLSSRDGITDLILKWVAYVTRSDDNLVFLTSLFDDGFKTKTLDKHELELEKEVGESVYFPRCGNLYVQNGFRTHT---EHACAAIAPGNAKAPS-TPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGK-CIKVLEDN 217          
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 5.830e-36
Identity = 98/248 (39.52%), Postives = 132/248 (53.23%), Query Frame = 0
Query:   92 ADYMVNYREGKGVVRIADGRVM-PIEGIGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLLSLKMMADRGHKYVGDKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSGEFALATIAPGKI-PSVSPVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTLRECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCMLVISDDFSRFTWTYFMRQKSDTVALFEQFLADERVAG 337
            AD  V Y E    VR+A G  + PI G G++ ++  S       +L  VAHVP LG                +G ++G       G+++     G L   +GFR      E A A IAPG    S + VDIN  H +HG  HE LLR+ A+Q G +L G L EC GC  AKGL KPI +T STRA K   R+FVD+ G+  V S+GGK   L++ DD++R+   YF++ KSD    FE++LA+ R  G
Sbjct:  840 ADGFVRYEECDRRVRVAAGETLFPIVGYGDVTVTLRSRDGTTDLLLKRVAHVPRLG----------------IGGREG-------GESVSFPRCGNLYVQNGFRTHT---EHAYAAIAPGNARTSSASVDINDVHVAHGHSHELLLRTMAKQQGTMLLGELPECLGCLTAKGLSKPIPKT-STRAAKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANG 1060          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig202466.5734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZQ8_9PHAE4.020e-5237.78Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE4.060e-5237.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE4.090e-5237.78Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5L8P7_9PHAE1.070e-4842.86Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JXF7_9PHAE2.640e-4439.92Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JW24_9PHAE4.190e-4135.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L060_9PHAE6.450e-4047.21Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2M6_9PHAE1.570e-3836.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSX8_9PHAE3.090e-3743.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K583_9PHAE5.830e-3639.52Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.60.10coord: 1..33
e-value: 5.0E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 126..331
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 268..334
e-value: 3.1E-6
score: 28.5
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 126..331
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 273..330
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 1..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig202466contigH-elongata_contig202466:83..1093 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig202466.5734.1mRNA_H-elongata_contig202466.5734.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig202466 83..1093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig202466.5734.1 ID=prot_H-elongata_contig202466.5734.1|Name=mRNA_H-elongata_contig202466.5734.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=337bp
CQKTGHIRPNCPERQCFKCRGWDHEANSCPSKIKTKEEATVMAVKQEPDF
EVSTMAIEVEKNVPPVGELPLESTVERWITDSGCSRFMTPSADYMVNYRE
GKGVVRIADGRVMPIEGIGNLPMSFWSGKDWVKAILPNVAHVPLLGYNLL
SLKMMADRGHKYVGDKKGVMLHLKNGKTLFGTSVGKLNCLSGFRRPLDSG
EFALATIAPGKIPSVSPVDINTFHASHGRVHEKLLRSTAQQLGVLLEGTL
RECEGCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGEKSVASIGGKRCM
LVISDDFSRFTWTYFMRQKSDTVALFEQFLADERVAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf
IPR036875Znf_CCHC_sf