prot_H-elongata_contig20235.5727.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20235.5727.1
Unique Nameprot_H-elongata_contig20235.5727.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
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BLAST of mRNA_H-elongata_contig20235.5727.1 vs. uniprot
Match: A0A6H5KKN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN9_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.310e-20
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 0 
Query:    1 KDTAEDEAVLGYMQRIKDIGQEANAFTKSRVQTHLLISNTVQLCHRMAADKYCQLSKDYPPGDTSDFD-YDFSTD 74
            +D   D+AVLG++QRIKDIGQ    FT SR+QTH LISNTVQLCHRMA D++ QL+KDYP  +  ++D YD STD
Sbjct:   22 QDPVVDDAVLGFIQRIKDIGQGVTVFTVSRLQTHSLISNTVQLCHRMAGDQHSQLAKDYPSVEQVEYDTYDQSTD 96
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BLAST of mRNA_H-elongata_contig20235.5727.1 vs. uniprot
Match: D8LPY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY0_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 4.500e-20
Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 0 
Query:    1 KDTAEDEAVLGYMQRIKDIGQEANAFTKSRVQTHLLISNTVQLCHRMAADKYCQLSKDYPPGDTSDFD-YDFSTD 74
            +D   D+AVLG++QRIKDIGQ    FT SR+QTH LISNTVQLCHRMA D++ QL+KDYP  +  ++D YD STD
Sbjct:   22 QDPVVDDAVLGFIQRIKDIGQGMTVFTVSRLQTHSLISNTVQLCHRMAGDQHSQLAKDYPSVEQVEYDTYDQSTD 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20235.5727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKN9_9PHAE2.310e-2062.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPY0_ECTSI4.500e-2062.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20235contigH-elongata_contig20235:4871..6835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20235.5727.1mRNA_H-elongata_contig20235.5727.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20235 4871..6835 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20235.5727.1 ID=prot_H-elongata_contig20235.5727.1|Name=mRNA_H-elongata_contig20235.5727.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
KDTAEDEAVLGYMQRIKDIGQEANAFTKSRVQTHLLISNTVQLCHRMAAD
KYCQLSKDYPPGDTSDFDYDFSTD
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