prot_H-elongata_contig202262.5725.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig202262.5725.1
Unique Nameprot_H-elongata_contig202262.5725.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length54
Homology
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BLAST of mRNA_H-elongata_contig202262.5725.1 vs. uniprot
Match: D7FHX6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX6_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 9.800e-19
Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 0 
Query:    1 REPCTPLNLQQFLSCVRATGDASLCHDFRDEVERCGMKMSQRMLKAALSDDWF 53
            R+ C P    Q L+C+R T DAS+CH+FRDEVERCG+KMSQR+L+AALSDDWF
Sbjct:   93 RQLC-PKEQSQLLACIRTTRDASMCHEFRDEVERCGVKMSQRLLRAALSDDWF 144
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig202262.5725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHX6_ECTSI9.800e-1967.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig202262contigH-elongata_contig202262:80..241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig202262.5725.1mRNA_H-elongata_contig202262.5725.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig202262 80..241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig202262.5725.1 ID=prot_H-elongata_contig202262.5725.1|Name=mRNA_H-elongata_contig202262.5725.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=54bp
REPCTPLNLQQFLSCVRATGDASLCHDFRDEVERCGMKMSQRMLKAALSD
DWF*
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