prot_H-elongata_contig20201.5715.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20201.5715.1
Unique Nameprot_H-elongata_contig20201.5715.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length116
Homology
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BLAST of mRNA_H-elongata_contig20201.5715.1 vs. uniprot
Match: A0A7S2RBK6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBK6_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.720e-14
Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 0 
Query:    4 GISAEQLVIFLASFRDVVSTADIVLFLEAPVNSRSKEVIDRYGAIGLEIEQVRLEPDFLRHRHSSSLRWVLAQRFLDAKIANYKNILVMDVGETFFQANP 103
            GIS E L +F  S R V  +A +VL+L++P+    + +++RY    LE     +EP FLR  H S+ RW L  R+L      Y+ +++ DV +T FQA+P
Sbjct:   40 GISPENLAVFCGSLRAVSPSAALVLYLDSPLPELHRRIVERYDVTALEFSVSLIEPAFLRKYHPSNYRWPLIHRYLKDHANAYRRVVLADVRDTMFQADP 139
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BLAST of mRNA_H-elongata_contig20201.5715.1 vs. uniprot
Match: A0A0H5RB21_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RB21_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 1.460e-9
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = 0 
Query:    1 MAMGISAEQLVIFLASFRDVVSTADIVLFLEAPVNSRSKEVIDRYGAIGLEIEQVRLEPDFLRHRHSSSLRWVLAQRFLDA-KIANYKNILVMDVGETFFQANPLHITGRD 110
            MA GIS + LV+F+ SFR+  + A +VLF+        K  ++ +    + +    + P  +R  H S+ RWVL + F+ A K+     +L++DV +T FQ++P  I   D
Sbjct:   88 MASGISLQDLVVFVKSFREATNDARLVLFMGIAAPEEHKRFLNEHDVETVLVNFDTMFPTQIRKFHPSNYRWVLLRNFVSAAKLNPMSRVLLVDVRDTVFQSDPFEIISPD 198
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20201.5715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2RBK6_9STRA1.720e-1438.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0H5RB21_9EUKA1.460e-932.43Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20201contigH-elongata_contig20201:5877..6453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20201.5715.1mRNA_H-elongata_contig20201.5715.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20201 5862..6453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20201.5715.1 ID=prot_H-elongata_contig20201.5715.1|Name=mRNA_H-elongata_contig20201.5715.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=116bp
MAMGISAEQLVIFLASFRDVVSTADIVLFLEAPVNSRSKEVIDRYGAIGL
EIEQVRLEPDFLRHRHSSSLRWVLAQRFLDAKIANYKNILVMDVGETFFQ
ANPLHITGRDGGRIC*
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