prot_H-elongata_contig201984.5713.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig201984.5713.1
Unique Nameprot_H-elongata_contig201984.5713.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
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BLAST of mRNA_H-elongata_contig201984.5713.1 vs. uniprot
Match: A0A6H5JR06_9PHAE (FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR06_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.960e-21
Identity = 54/63 (85.71%), Postives = 60/63 (95.24%), Query Frame = 0 
Query:    3 EEAKKKDVKKKEAPKEIALLDAKRAMNTSIAIARIKMSYAETRQAIMNVDETALASNVVQSLQ 65
            EEAKKKDV KKEAPKEI+LLD KRAMNTSIAIARIKM+YAETRQA+MN+DET L+SNV+QSLQ
Sbjct: 3128 EEAKKKDV-KKEAPKEISLLDGKRAMNTSIAIARIKMTYAETRQAVMNMDETVLSSNVLQSLQ 3189
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BLAST of mRNA_H-elongata_contig201984.5713.1 vs. uniprot
Match: D8LT97_ECTSI (Formin-like 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT97_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 4.980e-21
Identity = 53/63 (84.13%), Postives = 60/63 (95.24%), Query Frame = 0 
Query:    3 EEAKKKDVKKKEAPKEIALLDAKRAMNTSIAIARIKMSYAETRQAIMNVDETALASNVVQSLQ 65
            +EAKKKDV KKEAPKEI+LLD KRAMNTSIAIARIKM+YAETRQA+MN+DET L+SNV+QSLQ
Sbjct: 2256 DEAKKKDV-KKEAPKEISLLDGKRAMNTSIAIARIKMTYAETRQAVMNMDETVLSSNVLQSLQ 2317
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BLAST of mRNA_H-elongata_contig201984.5713.1 vs. uniprot
Match: A0A7R9YER3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YER3_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.630e-5
Identity = 29/65 (44.62%), Postives = 47/65 (72.31%), Query Frame = 0 
Query:    2 AEEAKKKDVKKKEAPKE-IALLDAKRAMNTSIAIARIKMSYAETRQAIMNVDETALASNVVQSLQ 65
            A +AK K   KK A KE +AL+D +RA N  IAIARIK++YA+ R+ I N+++++ ++  +++LQ
Sbjct:    5 ATQAKPKKAAKKSARKEKVALIDGRRATNAGIAIARIKLTYAQMREKITNLEDSSFSTVQMRTLQ 69
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig201984.5713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JR06_9PHAE1.960e-2185.71FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LT97_ECTSI4.980e-2184.13Formin-like 2 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A7R9YER3_9STRA1.630e-544.62Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015425Formin, FH2 domainPFAMPF02181FH2coord: 6..65
e-value: 4.2E-11
score: 42.6
IPR015425Formin, FH2 domainPROSITEPS51444FH2coord: 1..71
score: 11.896
NoneNo IPR availableGENE3D1.20.58.630coord: 1..69
e-value: 1.5E-15
score: 59.0
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 3..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig201984contigH-elongata_contig201984:457..672 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig201984.5713.1mRNA_H-elongata_contig201984.5713.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig201984 457..672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig201984.5713.1 ID=prot_H-elongata_contig201984.5713.1|Name=mRNA_H-elongata_contig201984.5713.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
QAEEAKKKDVKKKEAPKEIALLDAKRAMNTSIAIARIKMSYAETRQAIMN
VDETALASNVVQSLQVTYLVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015425FH2_Formin