prot_H-elongata_contig20180.5704.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20180.5704.1
Unique Nameprot_H-elongata_contig20180.5704.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length190
Homology
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Match: D8LLG8_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLG8_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.710e-54
Identity = 119/272 (43.75%), Postives = 147/272 (54.04%), Query Frame = 0
Query:    1 GRVDVLFNNAAVCLPGSDG-----------AVLEKTLAVNFYGALGVMEACLPAM-----------------------AADTETSLGP-TIVWVSSGDGELCYLSSKWQRLFRRAES-------------DGSDHVLPSEEAET----------------EFAFGQSPAYSLSKAAVNAVVRAWAPHLAAER------------------GVRLVAVCPGDVLTLMMSEEELARGDGVSPEQAALEVVGVALRPTYFLP-GKFYRNGKEICW 189
            GRVD+LFNNA VC P  DG            +L +TLAVNF+GAL V+EAC+PA+                       A  T TSL P T+VW+SSGDGELC+L SKW+ L   A+S               +D +  + +  +                E AFG +PAYSLSKAAVNA VR WAP + A                    GVRLVAVCPGDVLT M S+EE+ARGD VSPE+AA+EVV +AL     +P G+FYR+G+EI W
Sbjct:  146 GRVDILFNNAGVCFPEQDGNGPQNNRAAAAGILRETLAVNFFGALEVVEACVPALQAAAPMVARKEKKKAALMLEDNGATSTMTSLKPPTVVWISSGDGELCFLGSKWRGLLAEAQSLEDVKSPLSDLLATATDTITTTSKQNSTAPAGSQQEGEQGQVEEMAFGPTPAYSLSKAAVNAAVRTWAPCIQAPTVPAEAPENTKSRTGVRGGGVRLVAVCPGDVLTRMTSKEEMARGDAVSPEEAAVEVVDLALSSANDIPAGRFYRHGEEIGW 417          
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Match: A0A835YS44_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS44_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.820e-33
Identity = 94/217 (43.32%), Postives = 118/217 (54.38%), Query Frame = 0
Query:    1 GRVDVLFNNAAVCLPGSDGAVLEKTLAVNFYGALGVMEACLPAMAADTETSLGPTIVWVSSGDGELCYLSSKWQRLFRRAES-----DGSDHVLPSEEAE--TEFAFGQSPAYSLSKAAVNAVVRA-----WAPH---------LAAERG-------VRLVAVCPGDVLTLMMSEEELARGDGVSPEQAALEVVGVALRPTYFLPGKFYRNGKEICW 189
            G +  +FNNA VCLPG+D A L+ +L VNFYG L VMEACLP M  D E      +V VSSGDGEL +L+S      R+A++       +D +L     +   E AFG +PAYS+SKA +NA VR      +AP           A+ RG         ++AVCPGDV TLM SEEE  R   +S  +AA  VVG+A        G FYR G  I W
Sbjct:  127 GSLTAVFNNAGVCLPGADIATLQYSLGVNFYGPLRVMEACLPFM--DEEG----VVVNVSSGDGELLWLNSDIAEALRQAQTVQDVRAAADDILQRAALDPGAELAFGATPAYSVSKALLNAAVRCRHGIPYAPDPAEGALNAGRASSRGGGSTAQRPAVIAVCPGDVRTLMASEEEAQREGVLSALEAAAHVVGLATWRERTAGGLFYRYGAVIPW 337          
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Match: A0A7S1GWA1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GWA1_HEMAN)

HSP 1 Score: 122 bits (307), Expect = 4.480e-31
Identity = 82/198 (41.41%), Postives = 111/198 (56.06%), Query Frame = 0
Query:    4 DVLFNNAAVCLPGSDGAVLEKTLAVNFYGALGVMEACLPAMAADTETSLGPTIVWVSSGDGELCYLSSKWQRLFRRAESDGS-----DHVLPSEEAETEFAFGQSPAYSLSKAAVNAVVRAWA------PHLAAERGVRLVAVCPGDVLTLMMSEEELARGDGV-SPEQAALEVVGVALRPTYFLPGKFYRNGKEICW 189
            D+L +NA VCL GSD ++ +  + VNF+GAL ++ A  PAM        G  +V +SSG+GEL YL S+ Q L    ES        +  +   E   E AFG +P+YS+SKA +NA+ R  A      PH   +  + + AVCPGDV T M + +E    DGV SPEQAA++VV VAL P     G F+R+   I W
Sbjct:   75 DLLISNAGVCLEGSDRSIFDHAMQVNFFGALRMIRALAPAMRRK-----GGCVVNISSGEGELVYLCSRLQELLPSIESVDELCRVMEACIDDAEGGEELAFGPTPSYSVSKAGLNALTRILACSTRGSPH---DHTLGVRAVCPGDVDTAMCTLDEK---DGVLSPEQAAIDVVWVALHPEECANGGFFRHRDSIPW 261          
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Match: A0A7S2XFG2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFG2_9EUKA)

HSP 1 Score: 97.4 bits (241), Expect = 5.220e-21
Identity = 75/206 (36.41%), Postives = 105/206 (50.97%), Query Frame = 0
Query:    1 GRVDVLFNNAAVCLPGSDGAVLEKTLAVNFYGALGVMEACLPAMAADTET----SLGPTIVWVSSGDGELCYL-SSKWQRLFRRAESDGSDHVLPSEEAET-------EFAFGQSPAYSLSKAAVNAVVRAWAPHLAAERGVRLVAVCPGDVLTLMMSEEELARGDGVSPEQAALEVVGVALRPTYFLPGK-----FYRNGKEICW 189
            G VDVLFNNAAVCL GS+  V   +  +N  G L ++E  +     D       S    ++ VSS +GEL YL SS  + L   + SD    V+   E+         E+AFG +P YS+SKAA+ A+ +  A      R   + AVCPGDV T MM+ E+      VSP +A+ +VV +AL       GK     F+R  +++ W
Sbjct:  102 GGVDVLFNNAAVCLEGSNVEVARSSFQINVIGPLALVEGLMEQQKMDDRRERRKSTQRCVINVSSSEGELGYLHSSLAEALLTASASDDPQAVIRVLESIQNDFDPLLEYAFGPTPFYSVSKAALIALTQVLARRDPDGRSFAVHAVCPGDVSTSMMTPEQ--ESHAVSPAEASEDVVWLALAHPRRADGKLDHGKFWRYREQVEW 305          
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Match: L1IQ43_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IQ43_GUITC)

HSP 1 Score: 89.4 bits (220), Expect = 3.600e-19
Identity = 63/154 (40.91%), Postives = 85/154 (55.19%), Query Frame = 0
Query:   44 MAADTETSLGPTIVWVSSGDGELCYLSSKWQRLFRRAESDGSDHVLPSEEAE------TEFAFGQSPAYSLSKAAVNAVVRAWAPHLA-AERGVRLVAVCPGDVLTLMMSEEELARGDGV-SPEQAALEVVGVALRPTYFLPGKFYRNGKEICW 189
            +    E + G  I+ +SSGDGEL  L+S+ QRL +  +S+     L  E  E       E AFG +PAYS+SKAA+N + R  A  +  ++  +R VAVCPGDV T M S  E   GD V +P QAA +V+    RP+    G FYR  + I W
Sbjct:   13 LETSNENARGGIIINISSGDGELACLNSELQRLLKEVQSESDLESLLRELWEGTCLRGQELAFGPTPAYSVSKAALNVLTRIQAREIEMSQLKLRAVAVCPGDVDTRMCSAGE---GDRVLTPAQAAGDVIWAIERPSECPSGGFYREREPIPW 163          
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Match: A0A7S2ZT12_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT12_9RHOD)

HSP 1 Score: 84.0 bits (206), Expect = 3.080e-16
Identity = 66/202 (32.67%), Postives = 94/202 (46.53%), Query Frame = 0
Query:    1 GRVDVLFNNAAVCLPGSDGAVLEKTLAVNFYGALGVMEACLPAMAADTETSLGPTIVWVSSGDGELCYLSSKWQRLFRRAES------------DGSDHVLPSEEAETEFAFGQSPAYSLSKAAVNAVVRAWAPHLAAERGVRLVAVCPGDVLTLMMSEEELARGDGVSPEQAALEVVGVALR-PTYFLPGKFYRNGKEICW 189
            G +DV+ NNAAVCL     + L   L VNF+GA+  + ACL  + A     L      VSSGDGE  + S+  +  F   +S            + +D V P E        G+ P Y +SK A+N   R     L  E G+R+++VCPGDV T M            SP  AA  +  + +  P+ +  G F+R+ + I W
Sbjct:   81 GALDVIVNNAAVCLEEWSSSALTNCLEVNFFGAVRTV-ACLGQLLAKDACILN-----VSSGDGESVWFSTAVRERFEGVQSTNALLDALRDFAEKADAVPPEE-----VVHGEQPTYKVSKFALNCYTRLLHNDLN-ESGIRVLSVCPGDVRTRMNPSASR------SPSDAAKAIAELVVGGPSTYQSGSFFRDREVISW 264          
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Match: A0A7S0BP00_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BP00_9RHOD)

HSP 1 Score: 82.8 bits (203), Expect = 8.320e-16
Identity = 68/202 (33.66%), Postives = 97/202 (48.02%), Query Frame = 0
Query:    1 GRVDVLFNNAAVCLPGSDGAVLEKTLAVNFYGALGVMEACLPAMAADTETSLGPTIVWVSSGDGELCYLSSKWQRLFRRAES------------DGSDHVLPSEEAETEFAFGQSPAYSLSKAAVNAVVRAWAPHLAAERGVRLVAVCPGDVLTLMMSEEELARGDGVSPEQAALEVVGVALR-PTYFLPGKFYRNGKEICW 189
            G +DV+ NNAAVCL     + L   L VN +GA+  +  CL  +  +        IV VSSGDGE  +LS+  +  F + +S            + +D  LPS+E       G+ P Y +SK A+N   R     L  E G+R++AVCPGDV T M             P  AA  +V + +  P+ +  G FYR+ + I W
Sbjct:   81 GALDVIVNNAAVCLEDWSSSALMDCLEVNLFGAVRTVS-CLGQLLGEDAC-----IVNVSSGDGESVWLSTAVRERFEKVQSTKVLLDVLRELAEKADS-LPSQEV----VHGEQPTYKVSKFALNCYTRLLHNDLN-ESGIRVLAVCPGDVRTGMNPSASRC------PSDAAKAIVELVVGGPSTYQSGGFYRDCEIISW 264          
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Match: A0A7S0NQP3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NQP3_9EUKA)

HSP 1 Score: 80.5 bits (197), Expect = 7.100e-15
Identity = 73/196 (37.24%), Postives = 96/196 (48.98%), Query Frame = 0
Query:    4 DVLFNNAAVCLPGSDGAVLEKTLAVNFYGALGVMEACLPAMAADTETSLGPTIVWVSSGDGELCYLSSKWQRLFRRAESDGSDHVL------PSEEAETEFAFGQSPAYSLSKAAVNAVVRAWAPHLAAERG-----VRLVAVCPGDVLTLMMSEEELARGDGVSPEQAALEVVGVALRPTYFLP-GKFYRNGKEI 187
            +VL NNAAVC  G    V+ ++L  N  G L +         A    +    ++ VSSGDGEL YL+S  Q  FRRA S  +   L      P +      A   +PAYS+SKAA+NA+ R  A   A         V   AVCPGDV T M S E     + +S + AA ++V + LR    LP GKF+R  + I
Sbjct:   83 EVLINNAAVCERGWTRQVVRRSLKTNVIGPLALCRELGAVGCAAPRRARRLRVLNVSSGDGELVYLNSALQDEFRRASSVRTLLQLLARVTPPRQTIGGAPAHSPTPAYSVSKAALNALTRILAGEHAGGTSELCASVWFAAVCPGDVSTRMCSIEPR---EALSADAAAHDLVWL-LRHAEALPSGKFWRQCEAI 274          
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Match: R1DJ38_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DJ38_EMIHU)

HSP 1 Score: 78.6 bits (192), Expect = 1.280e-13
Identity = 72/210 (34.29%), Postives = 93/210 (44.29%), Query Frame = 0
Query:    2 RVDVLFNNAAVCLPGSDGAVLEKTLAVNFYGALGVMEACLPAMAADTETSLGPTIVWVSSGDGELCYLSS-------------KWQRLFRRAESDGSDHVLPSEEAETEFAFGQSPAYSLSKAAVNAVVRAWAPHLAAERGVRLVAVCPGDVLTLMMSEEELARGDGV-SPEQAALEVVGVAL----------RPTYFLPGKFYRNGKEI 187
            RVD+L NNAAVC PG    V  ++   N      +  A LP M      +    ++ VSSGDGEL +LSS             +  RL  R          P        A G +PAYS+SKAA+N   R     L  + GV + A CPGDV T M S E   R +GV SPE AA ++  +A                  G+F+R G+ I
Sbjct:  370 RVDLLVNNAAVCEPGWGRDVALRSFRTNVLAPATLTRAVLPGMLRRRRGA----VLHVSSGDGELVFLSSDLAPRLAGAASERELLRLLARLSRGRDGFRFPDRPP----AHGPTPAYSVSKAALNRHTRLVGDALPRDGGVWVGAACPGDVRTRMCSCE---RHEGVASPESAADDLARLAAGALGGXXXEAAARRLESGRFWRAGRTI 568          
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Match: R1EIL5_EMIHU (DNA ligase (ATP) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EIL5_EMIHU)

HSP 1 Score: 77.4 bits (189), Expect = 3.710e-13
Identity = 67/182 (36.81%), Postives = 85/182 (46.70%), Query Frame = 0
Query:    2 RVDVLFNNAAVCLPGSDGAVLEKTLAVNFYGALGVMEACLPAMAADTETSLGPTIVWVSSGDGELCYLSS-------------KWQRLFRRAESDGSDHVLPSEEAETEFAFGQSPAYSLSKAAVNAVVRAWAPHLAAERGVRLVAVCPGDVLTLMMSEEELARGDGV-SPEQAALEVVGVA 169
            RVD+L NNAAVC PG    V  ++   N      +  A LP M      +    ++ VSSGDGEL +LSS             +  RL  R          P        A G +PAYS+SKAA+N   R     L  + GV + A CPGDV T M S E   R +GV SPE AA ++  +A
Sbjct:   81 RVDLLVNNAAVCEPGWGRDVALRSFRTNVLAPATLTRAVLPGMLRRRRGA----VLHVSSGDGELVFLSSDLAPRLAGAASERELLRLLARLSRGRDGFRFPDRPP----AHGPTPAYSVSKAALNRHTRLVGDALPRDGGVWVGAACPGDVRTRMCSCE---RHEGVASPESAADDLARLA 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20180.5704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLG8_ECTSI1.710e-5443.75Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
A0A835YS44_9STRA1.820e-3343.32Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A7S1GWA1_HEMAN4.480e-3141.41Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S2XFG2_9EUKA5.220e-2136.41Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
L1IQ43_GUITC3.600e-1940.91Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S2ZT12_9RHOD3.080e-1632.67Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BP00_9RHOD8.320e-1633.66Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0NQP3_9EUKA7.100e-1537.24Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
R1DJ38_EMIHU1.280e-1334.29Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
R1EIL5_EMIHU3.710e-1336.81DNA ligase (ATP) n=1 Tax=Emiliania huxleyi TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 106..125
score: 34.97
coord: 128..145
score: 34.8
coord: 1..12
score: 50.25
NoneNo IPR availableGENE3D3.40.50.720coord: 1..189
e-value: 6.1E-29
score: 102.9
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 97..147
e-value: 8.2E-8
score: 32.1
NoneNo IPR availablePANTHERPTHR43490:SF60NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEINcoord: 1..186
NoneNo IPR availablePANTHERPTHR43490FAMILY NOT NAMEDcoord: 1..186
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20180contigH-elongata_contig20180:3255..4316 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20180.5704.1mRNA_H-elongata_contig20180.5704.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20180 3255..4316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20180.5704.1 ID=prot_H-elongata_contig20180.5704.1|Name=mRNA_H-elongata_contig20180.5704.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
GRVDVLFNNAAVCLPGSDGAVLEKTLAVNFYGALGVMEACLPAMAADTET
SLGPTIVWVSSGDGELCYLSSKWQRLFRRAESDGSDHVLPSEEAETEFAF
GQSPAYSLSKAAVNAVVRAWAPHLAAERGVRLVAVCPGDVLTLMMSEEEL
ARGDGVSPEQAALEVVGVALRPTYFLPGKFYRNGKEICW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf