prot_H-elongata_contig20175.5698.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20175.5698.1
Unique Nameprot_H-elongata_contig20175.5698.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Match: D7FI71_ECTSI (Ribosomal_L14e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI71_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 4.900e-37
Identity = 65/78 (83.33%), Postives = 71/78 (91.03%), Query Frame = 0
Query:    1 QALIDGPDTGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMAKWEASSWAKKRAKKVKRARMTDFDRFKV 78
            +ALI+GPDTGVPRQ+IPFKRLALTD+KL IQRNAR GTI  AAK  DL AKWEASSWAKK+AKKVKRA+MTDFDRFKV
Sbjct:   35 KALIEGPDTGVPRQLIPFKRLALTDFKLPIQRNARIGTIKAAAKEADLYAKWEASSWAKKKAKKVKRAQMTDFDRFKV 112          
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Match: A0A835YLN7_9STRA (Ribosomal protein L14-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN7_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 7.440e-25
Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 QALIDGPD--TGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMAKWEASSWAKKRAKKVKRARMTDFDRFKV 78
            +ALIDGP+  TGV RQMIPFKRLALTD+K+ I RNAR GT+ KA    D++AKW A++WA+KRA K KRA + D DRFK+
Sbjct:   35 KALIDGPEELTGVKRQMIPFKRLALTDFKVKILRNARQGTLKKAFAEADVLAKWGATAWARKRAAKAKRASLGDLDRFKL 114          
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Match: A0A6U6K629_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U6K629_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.630e-23
Identity = 49/80 (61.25%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 QALIDGPD--TGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMAKWEASSWAKKRAKKVKRARMTDFDRFKV 78
            + LIDGP+  TGV RQ+IP+KR+ALTD K+++QR+ARA T+  A K  D + KWE+SSWAKK A K KRA ++DFDRFKV
Sbjct:   35 KCLIDGPEEITGVSRQVIPYKRIALTDLKVNVQRSARAKTLKAAWKEGDTLNKWESSSWAKKLASKKKRANLSDFDRFKV 114          
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Match: A0A7S2AMT7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMT7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.050e-21
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    1 QALIDGPD--TGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMAKWEASSWAKKRAKKVKRARMTDFDRFKV 78
            + LIDGP   TGV RQ+IPFKR+ALTD+K+DI + A   T+  A +A D++ KWE++SWAKK A K KRA ++DFDRFK+
Sbjct:   35 KCLIDGPRKLTGVQRQIIPFKRIALTDFKVDIPKAASQKTLTAAIEAADILGKWESTSWAKKLAAKKKRANLSDFDRFKL 114          
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Match: A0A4D9CRD2_9STRA (Ribosomal_L14e domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRD2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.750e-21
Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    3 LIDGPDTGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMAKWEASSWAKKRAKKVKRARMTDFDRFKV 78
            L+DGPD+GV RQ+IP KR++LTD K+ I RNAR  T+ KA   E ++A+WE ++W KK   K KRA +TDFDRFK+
Sbjct:   39 LVDGPDSGVLRQVIPLKRVSLTDLKVKIPRNAREKTLKKAWVTEKIVARWEQTTWCKKLVAKAKRAALTDFDRFKL 114          
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Match: F0YD47_AURAN (Ribosomal_L14e domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD47_AURAN)

HSP 1 Score: 89.7 bits (221), Expect = 2.830e-21
Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    1 QALIDGP--DTGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMAKWEASSWAKKRAKKVKRARMTDFDRFKV 78
            + L+DGP   TGV RQ+IPFKR+ALTD  + I +NAR  T+NKA    D++AKW+ASSWAKK A K KRA +TDF RF++
Sbjct:   33 KCLVDGPATKTGVARQVIPFKRVALTDIVVKIPKNARQKTLNKAWDEADVLAKWDASSWAKKLAAKKKRASLTDFQRFQL 112          
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Match: W7TUK8_9STRA (Ribosomal protein l14 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUK8_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 9.020e-21
Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    3 LIDGPDTGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMAKWEASSWAKKRAKKVKRARMTDFDRFKV 78
            L+DGPD+GV RQ+IP KR++LTD K+ I RNAR  T+ KA   E ++A+WE ++W KK   K KRA +TDFDRFK+
Sbjct:  101 LVDGPDSGVLRQVIPLKRVSLTDLKVKIPRNAREKTLKKAWATEKIVARWEQTTWCKKLVAKAKRAALTDFDRFKL 176          
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Match: B5Y4G9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y4G9_PHATC)

HSP 1 Score: 88.2 bits (217), Expect = 1.200e-20
Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    1 QALIDGPD--TGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMAKWEASSWAKKRAKKVKRARMTDFDRFKV 78
            + LIDGP+  TGV RQ+I +KRLALTD K+DIQRNAR  ++ KA    D M KWE+SSWAKK   +  RA ++DFDRFKV
Sbjct:   35 KCLIDGPESITGVTRQVISYKRLALTDLKVDIQRNARQKSLLKAWTEADTMNKWESSSWAKKLTARKTRAGLSDFDRFKV 114          
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Match: A0A6V2NE85_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NE85_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.510e-20
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 0
Query:    1 QALIDGPD--TGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMAKWEASSWAKKRAKKVKRARMTDFDRFKV 78
            + LIDGP   TGV RQ+I + R+ALTD K++IQRNARA T+  A    D+  KW+ SSWAKK A K KRA ++DFDRFKV
Sbjct:   35 KCLIDGPTEITGVVRQVISYTRIALTDLKVNIQRNARAKTLKAAWAEADIQNKWDGSSWAKKLATKKKRASLSDFDRFKV 114          
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Match: A0A075ATE4_ROZAC (Ribosomal protein L14 domain-containing protein n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075ATE4_ROZAC)

HSP 1 Score: 86.7 bits (213), Expect = 4.040e-20
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    2 ALIDGPDTGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMAKWEASSWAKKRAKKVKRARMTDFDRFKV 78
            A++DGP TGV RQ + F+RLA+T +K+ + R +R+ TI K  +AE +  KWE +SWAKK A + KRA M+DFDRFK 
Sbjct:   26 AIVDGPTTGVARQQLSFRRLAVTPFKVSVPRGSRSKTIKKVFEAEKIAEKWETTSWAKKLAVREKRAAMSDFDRFKA 102          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20175.5698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI71_ECTSI4.900e-3783.33Ribosomal_L14e domain-containing protein n=2 Tax=E... [more]
A0A835YLN7_9STRA7.440e-2563.75Ribosomal protein L14-domain-containing protein n=... [more]
A0A6U6K629_9STRA1.630e-2361.25Hypothetical protein n=2 Tax=Odontellaceae TaxID=2... [more]
A0A7S2AMT7_9STRA1.050e-2157.50Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9CRD2_9STRA2.750e-2156.58Ribosomal_L14e domain-containing protein n=1 Tax=N... [more]
F0YD47_AURAN2.830e-2158.75Ribosomal_L14e domain-containing protein (Fragment... [more]
W7TUK8_9STRA9.020e-2156.58Ribosomal protein l14 n=1 Tax=Nannochloropsis gadi... [more]
B5Y4G9_PHATC1.200e-2060.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A6V2NE85_9STRA3.510e-2058.75Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A075ATE4_ROZAC4.040e-2053.25Ribosomal protein L14 domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..54
e-value: 1.4E-15
score: 59.1
IPR002784Ribosomal protein L14e domainPFAMPF01929Ribosomal_L14ecoord: 12..78
e-value: 2.4E-27
score: 95.2
IPR039660Ribosomal protein L14PANTHERPTHR1112760S RIBOSOMAL PROTEIN L14coord: 2..78
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 2..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20175contigH-elongata_contig20175:6324..6866 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20175.5698.1mRNA_H-elongata_contig20175.5698.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20175 6324..6866 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20175.5698.1 ID=prot_H-elongata_contig20175.5698.1|Name=mRNA_H-elongata_contig20175.5698.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
QALIDGPDTGVPRQMIPFKRLALTDYKLDIQRNARAGTINKAAKAEDLMA
KWEASSWAKKRAKKVKRARMTDFDRFKVGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014722Rib_L2_dom2
IPR002784Ribosomal_L14e_dom
IPR039660Ribosomal_protein_L14
IPR008991Translation_prot_SH3-like_sf