prot_H-elongata_contig201504.5683.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig201504.5683.1
Unique Nameprot_H-elongata_contig201504.5683.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Match: D8LQB1_ECTSI (INCENP_ARK-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB1_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 2.490e-40
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0
Query:   26 DKSSIPDWARGKTLAKILDRQYGGPNPLNPDKIFSEFFTCNLEHIFNTKKSKWDRSSSGNWHTDRLTIAEK 96
            DKS+IPDWARGK LAKILD+QYGGPNPLNPDKIF EFFTCNLEHIFNTKK KWDRSSSGNWHTDRLTIAEK
Sbjct:  549 DKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEK 619          
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Match: A0A6H5L3Q6_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q6_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 6.580e-40
Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0
Query:   26 DKSSIPDWARGKTLAKILDRQYGGPNPLNPDKIFSEFFTCNLEHIFNTKKSKWDRSSSGNWHTDRLTIAEK 96
            DKS+IPDWARGK LAKILD+QYGGPNPLNPDKIF EFFTCNLEHIFNTKK KWDRSSSGNWHTDRLTIAEK
Sbjct:  964 DKSAIPDWARGKALAKILDKQYGGPNPLNPDKIFPEFFTCNLEHIFNTKKQKWDRSSSGNWHTDRLTIAEK 1034          
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Match: D7G3R5_ECTSI (INCENP_ARK-bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3R5_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.900e-24
Identity = 40/67 (59.70%), Postives = 54/67 (80.60%), Query Frame = 0
Query:   30 IPDWARGKTLAKILDRQYGGPNPLNPDKIFSEFFTCNLEHIFNTKKSKWDRSSSGNWHTDRLTIAEK 96
            +P+WA  + +A  L+RQYGG  P+NP+KIF +F+TC+LE IF+T K KWDR S+G+W +DRLTIAEK
Sbjct:   42 VPEWATNEGIAAALERQYGGDKPINPNKIFVDFYTCSLETIFDTNKKKWDRKSTGDWMSDRLTIAEK 108          
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Match: A0A835ZCU2_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU2_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.740e-20
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 0
Query:   30 IPDWARGKTLAKILDRQYGGPNPLNPDKIFSEFFTCNLEHIFNTKKSKW-DRSSSGNWHTDRLTIAEK 96
            IP WARGK L   L+RQ+GG  P+NPD IF+EFFTC+L+HIF+T+K ++  RSSSGNW  D+LT+ E+
Sbjct:  460 IPAWARGKQLEAALERQFGGSAPINPDTIFAEFFTCDLQHIFDTRKKRYVTRSSSGNWLQDKLTLPER 527          
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Match: A0A7S2M2L9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M2L9_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 9.960e-18
Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   27 KSSIPDWARGKTLAKILDRQYG-GPNPLNPDKIFSEFFTCNLEHIFNTKKSKWDR-SSSGNWHTDRLTIAEK 96
            K  +P+WA+   L + L+RQ+  GPN L+PDKIF E  TCNLE IF+ KKS++ R +SSGNW  D +TIAEK
Sbjct:  227 KKKVPEWAQRHNLHRALERQFADGPNRLDPDKIFGEVLTCNLEEIFDKKKSRYQRRTSSGNWTKDHVTIAEK 298          
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Match: K0SBK4_THAOC (SAP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBK4_THAOC)

HSP 1 Score: 78.6 bits (192), Expect = 6.130e-15
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = 0
Query:   27 KSSIPDWARGKTLAKILDRQYG-GPNPLNPDKIFSEFFTCNLEHIFNTKKSKWDR-SSSGNWHTDRLTIAEK 96
            K ++P WA+   L + L++QY  GPN L+PDKIF E  +CNL+ IF+ KK+++ R +SSGNW  D +T  EK
Sbjct:  621 KKTVPQWAQKSNLMRALEKQYADGPNRLDPDKIFGEVLSCNLDEIFDKKKARYQRRTSSGNWSQDHVTAKEK 692          
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Match: A0A1E7FGC0_9STRA (INCENP_ARK-bind domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGC0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.150e-12
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   27 KSSIPDWARGKTLAKILDRQYGG---PNPLNPDKIFSEFFTCNLEHIFNTKKSKWDRS--SSGNWHTDRLTIAEK 96
            K  IP WA    L   L++QY G      ++PD+IF E  +C+LE IF TKK+K  RS  SSGNW  D++T+AEK
Sbjct:   30 KKKIPTWALRANLYPALEKQYNGHIGSRKVDPDEIFPEVQSCDLEAIFGTKKAKAYRSRASSGNWAQDKVTVAEK 104          
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Match: D8LJ56_ECTSI (INCENP_ARK-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ56_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.450e-12
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   30 IPDWARGKTLAKILDRQYGGPNPLNPDKIFSEFFTCNLEHIFNTKKSKWDR-SSSGNWHTDRLTIAE 95
            IP WA+G  L++ L RQY     ++PDKIF E FTC+LE IF   KS++ R  SS NW  DR+T  E
Sbjct:  195 IPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQE 261          
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Match: A0A6H5KX29_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX29_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 4.390e-12
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   30 IPDWARGKTLAKILDRQYGGPNPLNPDKIFSEFFTCNLEHIFNTKKSKWDR-SSSGNWHTDRLTIAE 95
            IP WA+G  L++ L RQY     ++PDKIF E FTC+LE IF   KS++ R  SS NW  DR+T  E
Sbjct: 1441 IPAWAKGSALSEALTRQYATGQKVDPDKIFPEVFTCDLEAIFPVTKSRYHRRGSSANWTPDRVTPQE 1507          
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Match: B8LC10_THAPS (Incenp-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LC10_THAPS)

HSP 1 Score: 67.4 bits (163), Expect = 2.260e-11
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 0
Query:   27 KSSIPDWARGKTLAKILDRQYG-GPNPLNPDKIFSEFFTCNLEHIFN-TKKSKW-DRSSSGNW 86
            K ++P WA+   L   L++Q+  GPN L+PDKIF E  TCNLE IF+ +KKS++ +R+SSGNW
Sbjct:  193 KKAVPTWAQRSNLHAALEKQFADGPNRLDPDKIFGEVLTCNLEDIFDKSKKSRYKNRTSSGNW 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig201504.5683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LQB1_ECTSI2.490e-4092.96INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
A0A6H5L3Q6_9PHAE6.580e-4092.96SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3R5_ECTSI1.900e-2459.70INCENP_ARK-bind domain-containing protein n=2 Tax=... [more]
A0A835ZCU2_9STRA1.740e-2060.29SAP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S2M2L9_9STRA9.960e-1855.56Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0SBK4_THAOC6.130e-1548.61SAP domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A1E7FGC0_9STRA1.150e-1248.00INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
D8LJ56_ECTSI1.450e-1250.75INCENP_ARK-bind domain-containing protein n=1 Tax=... [more]
A0A6H5KX29_9PHAE4.390e-1250.75SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
B8LC10_THAPS2.260e-1152.38Incenp-like protein (Fragment) n=1 Tax=Thalassiosi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005635Inner centromere protein, ARK-binding domainPFAMPF03941INCENP_ARK-bindcoord: 14..71
e-value: 3.0E-12
score: 46.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig201504contigH-elongata_contig201504:1..867 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig201504.5683.1mRNA_H-elongata_contig201504.5683.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig201504 1..867 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig201504.5683.1 ID=prot_H-elongata_contig201504.5683.1|Name=mRNA_H-elongata_contig201504.5683.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
PESGSESGEDGEEAAQEIAEPQEPNDKSSIPDWARGKTLAKILDRQYGGP
NPLNPDKIFSEFFTCNLEHIFNTKKSKWDRSSSGNWHTDRLTIAEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005635Inner_centromere_prot_ARK-bd