prot_H-elongata_contig200955.5662.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig200955.5662.1
Unique Nameprot_H-elongata_contig200955.5662.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
[Close]
BLAST of mRNA_H-elongata_contig200955.5662.1 vs. uniprot
Match: D7G0C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0C8_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 5.450e-25
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0 
Query:    1 VVEDGDHAIVVETLQSLRESEPALLVSVLDALGNLSLPSHLLGGITADALGLLESAEPATLPVLVR 66
            VVEDGDHA VVETLQSL++SEP LLV+VLDALGNLSLP  LLGGIT DALGLL+SA+P+TLPVLVR
Sbjct:  133 VVEDGDHAEVVETLQSLKDSEPQLLVAVLDALGNLSLPPRLLGGITEDALGLLDSAQPSTLPVLVR 198
[Close]
BLAST of mRNA_H-elongata_contig200955.5662.1 vs. uniprot
Match: A0A0D2WL35_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WL35_CAPO3)

HSP 1 Score: 52.8 bits (125), Expect = 2.720e-6
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0 
Query:    1 VVEDGDHAIVVETLQSLRESEPALLVSVLDALGNLSLPSHLLGGITADALGLLESAEPATLPVLVR 66
            ++ D +H  +V+ L  L  SEP L+V++LDAL NL+LP H +  I    L +L S + + +PV+VR
Sbjct:  465 ILNDAEHRRMVDCLSMLVTSEPKLMVTILDALSNLTLPPHQVDEIRDKILKMLASVDVSDMPVVVR 530
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig200955.5662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0C8_ECTSI5.450e-2583.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0D2WL35_CAPO32.720e-640.91Uncharacterized protein n=2 Tax=Capsaspora owczarz... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig200955contigH-elongata_contig200955:225..434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig200955.5662.1mRNA_H-elongata_contig200955.5662.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig200955 225..434 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig200955.5662.1 ID=prot_H-elongata_contig200955.5662.1|Name=mRNA_H-elongata_contig200955.5662.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
VVEDGDHAIVVETLQSLRESEPALLVSVLDALGNLSLPSHLLGGITADAL
GLLESAEPATLPVLVRKKE*
back to top