prot_H-elongata_contig199231.5599.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig199231.5599.1
Unique Nameprot_H-elongata_contig199231.5599.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Match: D8LTV7_ECTSI (Presenilin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV7_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 4.020e-24
Identity = 46/68 (67.65%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIPCDAFTYYGVLWNFAVVGV 68
            +   TFVIV +YWMRCM+CL+GYM +SS +LLG++GG +  +ALE++Q+PCDAFTYYGVLWNFAVVGV
Sbjct:  136 LAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGV 203          
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Match: A0A6H5KLU3_9PHAE (Presenilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU3_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 4.120e-24
Identity = 46/68 (67.65%), Postives = 59/68 (86.76%), Query Frame = 0
Query:    1 ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIPCDAFTYYGVLWNFAVVGV 68
            +   TFVIV +YWMRCM+CL+GYM +SS +LLG++GG +  +ALE++Q+PCDAFTYYGVLWNFAVVGV
Sbjct:  136 LAAATFVIVWMYWMRCMRCLVGYMAMSSAVLLGVMGGAVWAAALEVYQLPCDAFTYYGVLWNFAVVGV 203          
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Match: A0A7S2F2R2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2R2_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.440e-17
Identity = 40/68 (58.82%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    1 ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIPCDAFTYYGVLWNFAVVGV 68
            +   TF IV LY  RCMK L+GYM +SS++LLGL+G +ML +ALE++Q+PCDA T+Y + +NFAVVGV
Sbjct:   54 LAAATFGIVCLYKYRCMKLLIGYMMLSSMMLLGLMGSLMLWTALELWQVPCDAITFYFIAYNFAVVGV 121          
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Match: W7TKB5_9STRA (Presenilin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKB5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.200e-16
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0
Query:    1 ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIPCDAFTYYGVLWNFAVVGV 68
            I G TFV+V+LY  RCMKCL GYM +SS +LLGL+GG++  +AL  + +PCD FT+  VL+NFA VGV
Sbjct:  122 ICGATFVVVLLYKFRCMKCLFGYMALSSTMLLGLMGGLLWYTALIRWDLPCDYFTFVIVLYNFAFVGV 189          
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Match: A0A7S2XWZ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWZ8_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 5.220e-16
Identity = 37/68 (54.41%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    1 ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIPCDAFTYYGVLWNFAVVGV 68
            + G TF IV+LY  RCMKCL+GYM  SSV+LLG++GG++L +AL+ + +  D +TYY +L+NF++VGV
Sbjct:   87 LAGATFAIVLLYKFRCMKCLIGYMMFSSVMLLGIMGGMVLWTALDKWNVVMDEYTYYFILYNFSMVGV 154          
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Match: B7FQB3_PHATC (Presenilin n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQB3_PHATC)

HSP 1 Score: 77.8 bits (190), Expect = 1.580e-15
Identity = 38/68 (55.88%), Postives = 53/68 (77.94%), Query Frame = 0
Query:    1 ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIPCDAFTYYGVLWNFAVVGV 68
            I  +TFVIV+LY +R MKCL+GYM ISS  LLG++GG M++ A+ +++IP D  T+YG ++NF VVGV
Sbjct:   11 ICALTFVIVLLYHLRFMKCLIGYMIISSGTLLGVLGGNMMQVAVAIYEIPVDKLTFYGFIYNFCVVGV 78          
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Match: A0A7S4HP42_9STRA (Presenilin n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HP42_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.710e-15
Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    1 ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIPCDAFTYYGVLWNFAVVGV 68
            I G+TFVIV+LY  RCMKCL+GYM  SS  LLGL+G +ML+ A++ ++IP    T+  +LWNFA VGV
Sbjct:   58 IGGMTFVIVLLYKYRCMKCLIGYMVFSSASLLGLLGAIMLDVAVDKYRIPISKPTFVLLLWNFAAVGV 125          
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Match: A0A7S2A8L3_TRICV (Presenilin (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8L3_TRICV)

HSP 1 Score: 74.7 bits (182), Expect = 3.050e-14
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 0
Query:    1 ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIPCDAFTYYGVLWNFAVVGV 68
            I  +TFVIV+LY  RCMKCL+GYM  SS  LLGL+GGV+ + A++ ++IP D  T+   LWNFA VGV
Sbjct:  137 IGAMTFVIVLLYKYRCMKCLIGYMIFSSGSLLGLLGGVVAQVAVDKYRIPVDWLTFALGLWNFAAVGV 204          
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Match: A0A7S4S6U3_9STRA (Presenilin n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S6U3_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.060e-14
Identity = 36/68 (52.94%), Postives = 52/68 (76.47%), Query Frame = 0
Query:    1 ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIPCDAFTYYGVLWNFAVVGV 68
            I  +TFVIVILY  R M+CL+ YM  SS +LLG++GGV+ + A+E +++P DAF++   L+NFA+VGV
Sbjct:   58 ICALTFVIVILYKFRFMRCLIAYMVYSSAMLLGVLGGVLFDVAIEKYRLPVDAFSFLFALYNFALVGV 125          
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Match: A0A7S4VWV0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VWV0_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 8.380e-14
Identity = 36/68 (52.94%), Postives = 52/68 (76.47%), Query Frame = 0
Query:    1 ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIPCDAFTYYGVLWNFAVVGV 68
            I  +TFVIVILY  R M+CL+ YM  SS +LLG++GGV+ + A+E +++P DAF++   L+NFA+VGV
Sbjct:   58 ICALTFVIVILYKFRFMRCLIAYMVYSSAMLLGVLGGVLFDVAIEKYRLPVDAFSFLFALYNFALVGV 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig199231.5599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTV7_ECTSI4.020e-2467.65Presenilin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KLU3_9PHAE4.120e-2467.65Presenilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A7S2F2R2_9STRA7.440e-1758.82Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TKB5_9STRA2.200e-1658.82Presenilin-like protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2XWZ8_9STRA5.220e-1654.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
B7FQB3_PHATC1.580e-1555.88Presenilin n=3 Tax=Phaeodactylum tricornutum TaxID... [more]
A0A7S4HP42_9STRA2.710e-1557.35Presenilin n=1 Tax=Odontella aurita TaxID=265563 R... [more]
A0A7S2A8L3_TRICV3.050e-1457.35Presenilin (Fragment) n=1 Tax=Trieres chinensis Ta... [more]
A0A7S4S6U3_9STRA3.060e-1452.94Presenilin n=1 Tax=Ditylum brightwellii TaxID=4924... [more]
A0A7S4VWV0_9STRA8.380e-1452.94Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001108Peptidase A22A, presenilinPFAMPF01080Presenilincoord: 1..68
e-value: 2.9E-19
score: 69.1
IPR001108Peptidase A22A, presenilinPANTHERPTHR10202PRESENILINcoord: 1..68
NoneNo IPR availablePANTHERPTHR10202:SF13PRESENILIN HOMOLOGcoord: 1..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableTMHMMTMhelixcoord: 20..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig199231contigH-elongata_contig199231:915..1118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig199231.5599.1mRNA_H-elongata_contig199231.5599.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig199231 915..1118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig199231.5599.1 ID=prot_H-elongata_contig199231.5599.1|Name=mRNA_H-elongata_contig199231.5599.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
ITGVTFVIVILYWMRCMKCLLGYMTISSVLLLGLIGGVMLESALEMFQIP
CDAFTYYGVLWNFAVVGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001108Peptidase_A22A