prot_H-elongata_contig198293.5552.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig198293.5552.1
Unique Nameprot_H-elongata_contig198293.5552.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Match: A0A177U1E5_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U1E5_9BASI)

HSP 1 Score: 93.2 bits (230), Expect = 6.250e-19
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKRKIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAALGWEARQLDVDMTYGEKPLQQ 121
            EA+  S+W +W +A+  +M    G   W +V+ P G+  +G+R V+K K+D++GK + +K  LV QGF QV G+ Y E+  P     S+R++L++ A  GW   Q+DV   Y    L++
Sbjct:  737 EARRRSDWEKWNKAMDEQMDALVGMHTWDLVQLPPGRKAIGSRWVYKLKLDEEGKADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEE 855          
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Match: A0A5R9QKQ6_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Labilibacter sediminis TaxID=2570926 RepID=A0A5R9QKQ6_9BACT)

HSP 1 Score: 91.7 bits (226), Expect = 7.710e-19
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKRKIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAALGWEARQLDVDMTYGEKPLQQ 121
            EA  SSE PQWK AI SE+        W++V+ P G   LG R +FKRK+  DG I+ YK  LV +G+RQ +G+ Y ++  P    TSIRMVL+I A    +  Q+DV   +    L++
Sbjct:   35 EAVNSSEGPQWKEAIKSEIESILQNHTWELVDLPPGSKPLGYRWIFKRKMKADGSIDKYKARLVVKGYRQKEGLDYFDTYSPVTRITSIRMVLAIAAIRNLQIHQMDVKTAFLNGELEE 153          
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Match: D1MBJ6_AGABI (Polyprotein n=1 Tax=Agaricus bisporus var. bisporus TaxID=192523 RepID=D1MBJ6_AGABI)

HSP 1 Score: 92.8 bits (229), Expect = 8.600e-19
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKRKIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAALGWEARQLDVDMTY 114
            EA   ++WP WK+A+  E+A     G W++V+CP G  ++G++ VFK K D  G I  YK  LV QG+ Q+ G+ Y ++  P    +SIR VL+I  A   E  Q+DV   Y
Sbjct:  886 EATQRTDWPLWKKAMEEELATLQAAGTWELVDCPLGINIVGSKWVFKAKKDAAGNIVRYKARLVAQGYSQIPGVDYFDTFAPVARLSSIRTVLAIATARNLEIHQIDVKGAY 997          
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Match: A0A177U0B1_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177U0B1_9BASI)

HSP 1 Score: 92.0 bits (227), Expect = 1.340e-18
Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = 0
Query:    7 SSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKRKIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAALGWEARQLDVDMTY 114
            S+EW QWK+A+  E+A  T  G W +VE   G  ++G+R V+K K+D+DG    YK  LV QGF Q +GI ++E+  P     ++R+V+S+  ALG     +D+   Y
Sbjct:   34 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAY 141          
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Match: A0A177T913_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177T913_9BASI)

HSP 1 Score: 92.0 bits (227), Expect = 1.570e-18
Identity = 49/141 (34.75%), Postives = 75/141 (53.19%), Query Frame = 0
Query:    1 MDEAQASSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKRKIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAALGWEARQLDVDMTYG----EKPL---QQSTNEACGHQALHC 134
            + +A   ++W  W +A+  EM   +  G W + E P+ + ++G+R VFK K+D +G +  YK  LV QGF Q+ G+ Y E+  P     +IR +L++ A LGW   QLDV   Y     +KP+   Q    E  G + L C
Sbjct:  665 LKDAMRRTDWALWLQAMREEMESHSEMGTWVLEEVPEDRELVGSRWVFKLKLDSEGNVARYKARLVAQGFSQIPGVDYNETYSPVTRFVTIRTLLALAAFLGWHVHQLDVITAYLYGLLDKPVFMRQPPGFEVAGKEHLAC 805          
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Match: A0A177VSQ5_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177VSQ5_9BASI)

HSP 1 Score: 92.0 bits (227), Expect = 1.580e-18
Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = 0
Query:    7 SSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKRKIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAALGWEARQLDVDMTY 114
            S+EW QWK+A+  E+A  T  G W +VE   G  ++G+R V+K K+D+DG    YK  LV QGF Q +GI ++E+  P     ++R+V+S+  ALG     +D+   Y
Sbjct:  703 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAY 810          
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Match: A0A177VQ04_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VQ04_9BASI)

HSP 1 Score: 91.3 bits (225), Expect = 2.900e-18
Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 0
Query:    1 MDEAQASSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKRKIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAALGWEARQLDVDMTY 114
            + +A   S+W QW +A+  EM   +  G W + + P  + ++G+R VFK K+D +G +  YK  LV QGF Q+ G+ Y E+  P     +IR +L++ A  GW+  QLDV   Y
Sbjct:  613 LKDAMRRSDWAQWLQAMREEMESHSEMGTWVLEKVPDDRELVGSRWVFKLKLDSEGAVSRYKARLVAQGFSQIFGVDYNETYSPVTRFVTIRTLLALAAYFGWQIHQLDVVTAY 726          
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Match: A0A177U2V9_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U2V9_9BASI)

HSP 1 Score: 90.9 bits (224), Expect = 3.740e-18
Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0
Query:    7 SSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKRKIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAALGWEARQLDVDMTY 114
            S EW QWK+A+  E+A  T  G W +VE   G  ++G+R V+K K+D+DG    YK  LV QGF Q +GI ++E+  P     ++R+V+S+  ALG     +D+   Y
Sbjct:  232 SVEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAY 339          
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Match: A0A177VM49_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VM49_9BASI)

HSP 1 Score: 90.9 bits (224), Expect = 3.960e-18
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 0
Query:    1 MDEAQASSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKRKIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAALGWEARQLDVDMTY 114
            + +A   ++W  W  A+  E+A  T  G W + E P  + ++G+R VFK K+D DG +  YK  LV QGF QV G+ + E+  P     +IR +L++ A LGW   QLDV   Y
Sbjct:  638 LKDAMRRTDWGLWLEAMKEEIASHTEMGTWVLEELPADRDLVGSRWVFKLKLDTDGCVARYKARLVAQGFSQVPGVDFHETYSPVTRFVTIRTLLALAAYLGWHVHQLDVVTAY 751          
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Match: A0A2U1QLY4_ARTAN (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QLY4_ARTAN)

HSP 1 Score: 90.5 bits (223), Expect = 4.880e-18
Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKRKIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAALGWEARQLDVDMTYGEKPLQQ 121
            EA  SSE PQWK AI SE+        W++V+ P G   LG + +FK+K+  DG I+ YK  LV +GFRQ +G+ Y ++  P    TSIRM+L+I A    E  Q+DV   +    L++
Sbjct:  105 EAVTSSEGPQWKEAIKSEIDSILQNHTWELVDLPPGCKPLGYKWIFKKKMKADGTIDKYKARLVIKGFRQREGLDYFDTYLPVTRITSIRMILAIAALRNLEVHQMDVKTAFLNGDLEE 223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig198293.5552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A177U1E5_9BASI6.250e-1936.13Integrase catalytic domain-containing protein n=2 ... [more]
A0A5R9QKQ6_9BACT7.710e-1942.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
D1MBJ6_AGABI8.600e-1940.18Polyprotein n=1 Tax=Agaricus bisporus var. bisporu... [more]
A0A177U0B1_9BASI1.340e-1839.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177T913_9BASI1.570e-1834.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A177VSQ5_9BASI1.580e-1839.81Integrase catalytic domain-containing protein n=1 ... [more]
A0A177VQ04_9BASI2.900e-1836.84Integrase catalytic domain-containing protein n=2 ... [more]
A0A177U2V9_9BASI3.740e-1839.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177VM49_9BASI3.960e-1838.60Integrase catalytic domain-containing protein n=2 ... [more]
A0A2U1QLY4_ARTAN4.880e-1841.18Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..116
e-value: 7.5E-17
score: 61.8
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 2..125
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig198293contigH-elongata_contig198293:272..775 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig198293.5552.1mRNA_H-elongata_contig198293.5552.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig198293 266..775 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig198293.5552.1 ID=prot_H-elongata_contig198293.5552.1|Name=mRNA_H-elongata_contig198293.5552.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
MDEAQASSEWPQWKRAIASEMAKQTGRGVWQVVECPKGKTVLGTRVVFKR
KIDKDGKIENYKCCLVGQGFRQVKGIHYEESSFPTPAQTSIRMVLSIIAA
LGWEARQLDVDMTYGEKPLQQSTNEACGHQALHCPRRDRGGGGSPRRRSV
RGTARRYPHEVRRRQDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like