prot_H-elongata_contig19804.5541.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19804.5541.1
Unique Nameprot_H-elongata_contig19804.5541.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length605
Homology
BLAST of mRNA_H-elongata_contig19804.5541.1 vs. uniprot
Match: D7FNL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL3_ECTSI)

HSP 1 Score: 389 bits (1000), Expect = 3.080e-116
Identity = 286/664 (43.07%), Postives = 362/664 (54.52%), Query Frame = 0
Query:    1 YRVGDRVLARTAGKPAR----EATIVEIDPLDGSRFNLAFKDKRKKGGWRLKGDLTLFSKKASTARTDTTAAT-LAATPIPASMEEATSAKKTSIPLQEGGKASQTGKPTKGKCTKERKKVEEKAAGTAASVENGEEIAGGVCAFGNAAWDQGPPPK--RSAATVAERAMPSMHQRYRQSQKAYTADGGASHAGGVSG------------------------------------NSGAKNSQNNESXXXXXXXATPRASSTPLTGKSPRTPREGWTRPKLVTPGSLEGRTEPALRTMHPWEVVRPRKAFKIQQSKSAAKSRE-----DARAAQAPASTFAGRFASSRPALRRPLCQPSHTLQEVKRGIIINRAGAPRRVD-------ENNEEEPRRGRRARRQVHPSLSEDKMAAVSFG---DVQSDDDATSEDENESPSHRRPGDEDQKEKPPPRFWKTAQ--PWGEGDVPRIKASAERESVTLSLQEDGAPLSSDRSAIATVSFLADYHRHSGEQLANVLTAKKFLCYHKVDNRVFVLTSCKESEQKTTLKRVRELALSRCGVRVETTPWLVGRPALDEFLDNHRRVLHHIVRHRLAVDTWSEVDGVYFNGLFRGRGSRRTFNGVRLGINLAVSSVADLETGVWDLWITAEPTVHRFSAIDW 604
            + VG+ VL  TAGK A     EAT+VE+DP D SRF +AFK+KRK+GGWR + +L+   ++     T T  A+       P S   A+  K  +  L +GG+AS+   P  G  ++ R +                               +GPP +  + +A+  ER +  +  R   +    T       +GG+SG                                     +  K          XXXX         +T K+PR  ++GW RP +VTPGS+EGR E ALRT HP E++RPRK FK+QQ++   K+R       +R A AP S+F+     S  A RR LCQPSH++++ KRG      G  R          ++  +  RRGRRARRQVHPSLSED MAA + G   D +SD+D               GD       P RF +T++  PWGEGD P IK       V LSL E  APLS++RSA+A V+F+ D HR+S EQLANVLTA+ FLCY   D RVFVLT  KE++QK  L+RVRELALSRCGV V+ TPWL GRPALDEFLDNHR VL  I+RHRLA   WSEV GVYFN LF GR S+RTFNGVRL INLAVS    LETGVW+LW+T EP VHRFS +DW
Sbjct:  427 FGVGEAVLVSTAGKTAATASFEATVVEVDPSDSSRFRVAFKNKRKQGGWRHRSELSALMRRTGARSTATRPASGSVGNAGPTSGSSASHEKSRAGMLGQGGRASEA--PALGAASEARARA------------------------------KGPPGQGLQRSASQGERPVDKVGNRKTAAPAMDTT--AVRESGGISGPPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAIKKKPVKKGGQAKXXXXXXXXXXXXXITKKTPR--KKGWQRPTVVTPGSVEGRPESALRTTHPTEIIRPRKQFKVQQARVTPKARAGSSNPSSRGAAAPRSSFSAGRGGSASAPRRMLCQPSHSVRDAKRGGFEGGDGGDRSSGVGGGAGADDESDVVRRGRRARRQVHPSLSEDTMAAANGGIESDYRSDEDGXX-----XXXXXXXGDA------PFRF-RTSEVAPWGEGDRPLIK-------VRLSLLEGDAPLSAERSALAVVTFVFDRHRYSAEQLANVLTAEGFLCYRDEDKRVFVLTESKEADQKEALRRVRELALSRCGVEVKATPWLEGRPALDEFLDNHRGVLDLIIRHRLACGMWSEVGGVYFNALFCGRRSKRTFNGVRLQINLAVSHNRALETGVWELWMTVEPVVHRFSPVDW 1035          
BLAST of mRNA_H-elongata_contig19804.5541.1 vs. uniprot
Match: A0A6H5L2K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2K3_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 4.130e-107
Identity = 271/637 (42.54%), Postives = 338/637 (53.06%), Query Frame = 0
Query:    1 YRVGDRVLARTAGKPAR----EATIVEIDPLDGSRFNLAFKDKRKKGGWRLKGDLTLFSKKASTARTDTTAATLAATPIPA-SMEEATSAKKTSIPLQEGGKASQT------------GKPTKGKCTKERKKVEEKAAGTAASVENGEEIAGGVCAFGNAAWDQGPPPKRSAATVAERAMPSMHQRYRQSQKAYTADGGASHAGGVSGNSGAKNSQNNESXXXXXXXATPRASSTPLTGKSPRTPREGWTRPKLVTPGSLEGRTEPALRTMHPWEVVRPRKAFKIQQSKSAAKSREDA-----RAAQAPASTFAGRFASSRPALRRPLCQPSHTLQEVKRGIIINRAGAPRRVD-------ENNEEEPRRGRRARRQVHPSLSEDKMAAVSFGDVQSDDDATSEDENESPSHRRPGDEDQKEKPPPRFWKTAQ--PWGEGDVPRIKASAE--RESVTLSLQEDGAPLSSDRSAIATVSFLADYHRHSGEQLANVLTAKKFLCYHKVDNRVFVLTSCKESEQKTTLKRVRELALSRCGVRVETTPWLVGRPALDEFLDNHRRVLHHIVRHRLAVDTWSEVDGVYFNGLFRGRGSRRTFNGVRLGINLAVSSVADLETGVWDLWITAEPTVHRFSAIDW 604
            + VG+ VL  TAGK A     EAT+VE+DP D SRF +AFK+KRK+GGWR + +L+   ++     T T  A+ +     A S   A   +  +  L +GG+AS               K   G+C +      E+      S +    +          A  + P  KRSA                          G            A N +  +      XX                    GW RP +VTPGS EGR E ALRT HP  ++RPRK FK+QQ++   K+R  +     R A  P S+F+     S P  RR LCQPSH++++ KRG      G  R          ++  +  RRGRRARRQVHPSLSED MAA + G ++SD  + +E   E                P RF +T++  PWGEGD P IK         V LSL E  APLS++RSA+A V+F+ D HR+S EQLANVLTA+ FLCY +   RVFVLT  KE+ QK  L RVRELALSRCGV V+ TPWL GRPAL+EFLDNHR VL  I+RHRLA   WSEV GVYFN LF GR S+RTFNGVRL INLAVS    LETGVW+LW+T EP VHRFS +DW
Sbjct:  435 FGVGEAVLVSTAGKTAATASFEATVVEVDPSDSSRFRVAFKNKRKQGGWRHRSELSALIRRTGARSTATRPASGSVGNAGATSGSSARHERSRAGVLGQGGRASGAPALDAASEARAGAKRPPGQCLQRSASEGERPVDKVGSRKATASVMDATAVGEGGAVSRPPKRKRSAXXXXXXXXXXXXXXXXXXXXXXXXXXGVE----------AINKKPVKKGGHAKXXXXXXXXXXXXXXXXXXXXXXGWQRPTVVTPGSAEGRPESALRTTHPTGIIRPRKQFKVQQARETPKNRTGSSDPTSRGATTPRSSFSAGRGGSAP--RRMLCQPSHSVRDAKRGGFEGGDGGDRSSGVGGGAGADDESDVVRRGRRARRQVHPSLSEDTMAAANGG-IESDYGSGAEGSGEXXXXXXXXXXXXDA--PFRF-RTSEFAPWGEGDRPLIKVETALMEAKVRLSLLEGDAPLSAERSALAVVTFVFDRHRYSAEQLANVLTAEGFLCYREEGTRVFVLTESKEANQKEALMRVRELALSRCGVEVKATPWLKGRPALNEFLDNHRGVLDLIIRHRLACGMWSEVGGVYFNALFCGRRSKRTFNGVRLQINLAVSHNRALETGVWELWMTVEPVVHRFSPVDW 1055          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19804.5541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNL3_ECTSI3.080e-11643.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2K3_9PHAE4.130e-10742.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19804contigH-elongata_contig19804:278..3794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19804.5541.1mRNA_H-elongata_contig19804.5541.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19804 278..3794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19804.5541.1 ID=prot_H-elongata_contig19804.5541.1|Name=mRNA_H-elongata_contig19804.5541.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=605bp
YRVGDRVLARTAGKPAREATIVEIDPLDGSRFNLAFKDKRKKGGWRLKGD
LTLFSKKASTARTDTTAATLAATPIPASMEEATSAKKTSIPLQEGGKASQ
TGKPTKGKCTKERKKVEEKAAGTAASVENGEEIAGGVCAFGNAAWDQGPP
PKRSAATVAERAMPSMHQRYRQSQKAYTADGGASHAGGVSGNSGAKNSQN
NESKGKGKGKATPRASSTPLTGKSPRTPREGWTRPKLVTPGSLEGRTEPA
LRTMHPWEVVRPRKAFKIQQSKSAAKSREDARAAQAPASTFAGRFASSRP
ALRRPLCQPSHTLQEVKRGIIINRAGAPRRVDENNEEEPRRGRRARRQVH
PSLSEDKMAAVSFGDVQSDDDATSEDENESPSHRRPGDEDQKEKPPPRFW
KTAQPWGEGDVPRIKASAERESVTLSLQEDGAPLSSDRSAIATVSFLADY
HRHSGEQLANVLTAKKFLCYHKVDNRVFVLTSCKESEQKTTLKRVRELAL
SRCGVRVETTPWLVGRPALDEFLDNHRRVLHHIVRHRLAVDTWSEVDGVY
FNGLFRGRGSRRTFNGVRLGINLAVSSVADLETGVWDLWITAEPTVHRFS
AIDW*
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