prot_H-elongata_contig197678.5521.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig197678.5521.1
Unique Nameprot_H-elongata_contig197678.5521.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Match: D8LLV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV5_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 2.900e-19
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    2 AARHALREGWTCEDIGAEARETCRNWFYKTACIRELLPRILIE 44
            AARHAL  GWTC+D+ AEARETCRNWFYKTACIRELLPRILIE
Sbjct:  502 AARHALPRGWTCDDVSAEARETCRNWFYKTACIRELLPRILIE 544          
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Match: A0A6H5JSK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK9_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 7.380e-19
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0
Query:    3 ARHALREGWTCEDIGAEARETCRNWFYKTACIRELLPRILIE 44
            ARHAL  GWTC+D+ AEARETCRNWFYKTACIRELLPRILIE
Sbjct:  102 ARHALPRGWTCDDVSAEARETCRNWFYKTACIRELLPRILIE 143          
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Match: W4GKY1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GKY1_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 9.240e-13
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    5 HALREGWTCEDIGAEARETCRNWFYKTACIRELLPRILIE 44
            H L  G+TC D+  EA+ETCRNWFYKTACIRELLPRI  E
Sbjct:  294 HVLPHGFTCVDVDIEAKETCRNWFYKTACIRELLPRIYTE 333          
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Match: A0A024TLM6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TLM6_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 6.000e-12
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    5 HALREGWTCEDIGAEARETCRNWFYKTACIRELLPRILIE 44
            HAL  G+T  D+  EA+ETCRNWFYKTACIRELLPRI  E
Sbjct:  304 HALPHGFTSGDVDIEAKETCRNWFYKTACIRELLPRIYTE 343          
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Match: A0A418AU07_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AU07_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.090e-11
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    5 HALREGWTCEDIGAEARETCRNWFYKTACIRELLPRI 41
            HAL  G+T  D+  EA+ETCRNWFYKTACIRELLPRI
Sbjct:  296 HALPHGFTSGDVDIEAKETCRNWFYKTACIRELLPRI 332          
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Match: A0A024GSE6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GSE6_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 9.980e-11
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    3 ARHALREGWTCEDIGAEARETCRNWFYKTACIRELLPRILIE 44
            A  +L +G++  DI  +A ETCRNWFYKTACIRELLPRI IE
Sbjct:  307 ASSSLPQGFSSTDINVQAMETCRNWFYKTACIRELLPRIYIE 348          
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Match: A0A5D6XHA6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHA6_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.870e-10
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    7 LREGWTCEDIGAEARETCRNWFYKTACIRELLPRILIE 44
            L E +   D+  +A+ETCRNWFYKTACIRELLPRI IE
Sbjct:  353 LAESFVSSDVNIQAKETCRNWFYKTACIRELLPRIYIE 390          
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Match: A0A0P1A9N7_PLAHL (Predicted membrane protein (Associated with esophageal cancer in humans) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9N7_PLAHL)

HSP 1 Score: 63.2 bits (152), Expect = 1.870e-10
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    7 LREGWTCEDIGAEARETCRNWFYKTACIRELLPRILIE 44
            L++ +   DI  +A+ETCRNWFYKTACIRELLPRI IE
Sbjct:  160 LKDNFMSSDINIQAKETCRNWFYKTACIRELLPRIYIE 197          
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Match: K3WSD6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSD6_GLOUD)

HSP 1 Score: 62.4 bits (150), Expect = 3.490e-10
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    7 LREGWTCEDIGAEARETCRNWFYKTACIRELLPRILIE 44
            L E +   D+   A+ETCRNWFYKTACIRELLPRI IE
Sbjct:  287 LSENFVSSDVNIHAKETCRNWFYKTACIRELLPRIYIE 324          
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Match: A0A3M6VWN9_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VWN9_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 4.770e-10
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    7 LREGWTCEDIGAEARETCRNWFYKTACIRELLPRILIE 44
            L E +T  DI  +A ETCRNWFYK+ACIRELLPRI IE
Sbjct:  301 LGEHFTSSDINVQATETCRNWFYKSACIRELLPRIYIE 338          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197678.5521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLV5_ECTSI2.900e-1988.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSK9_9PHAE7.380e-1988.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4GKY1_9STRA9.240e-1372.50Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A024TLM6_9STRA6.000e-1272.50Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
A0A418AU07_9STRA2.090e-1175.68Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024GSE6_9STRA9.980e-1166.67Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A5D6XHA6_9STRA1.870e-1068.42Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1A9N7_PLAHL1.870e-1068.42Predicted membrane protein (Associated with esopha... [more]
K3WSD6_GLOUD3.490e-1068.42Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3M6VWN9_9STRA4.770e-1071.05Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029705VPS35 endosomal protein sorting factor-likePANTHERPTHR13673ESOPHAGEAL CANCER ASSOCIATED PROTEINcoord: 6..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig197678contigH-elongata_contig197678:189..320 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig197678.5521.1mRNA_H-elongata_contig197678.5521.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig197678 189..320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig197678.5521.1 ID=prot_H-elongata_contig197678.5521.1|Name=mRNA_H-elongata_contig197678.5521.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
AAARHALREGWTCEDIGAEARETCRNWFYKTACIRELLPRILIE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029705VPS35L