prot_H-elongata_contig19735.5506.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Match: D7FZW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW0_ECTSI) HSP 1 Score: 160 bits (406), Expect = 4.700e-38 Identity = 163/480 (33.96%), Postives = 208/480 (43.33%), Query Frame = 0
Query: 514 LAPMGRGAGKRG----------GGAQESKPRGWGGPLGRIVGQLQQSGPVATSTSSVGESGTSI-----KDTCSGRGDSAGPDGVEACINRVERGGVFGPRGGIGRGGMGMASAFGRPGRGFGHE--RRHSAGAGVKYADGRGSVDRGDRGSQGGGGARKRGRGEWKKEYSVIASVDKE------------KEKNDDSKYACFQEFPTDMRPQAGDVLAFKTLSLNEETWTPELSAYREATVAAFDPATDRVMLLPSGAPVVYNWQQRSGGGEPGSKAQETAETAAEHENVLVEVEGKGESSRQSPSSGNTLPINAGRVEEAESARGKQTPADAGAAMGTVALPSGPEEGGKDLVAQVTVDH------------------------------------SSVSAAGAGKPAPVDDDGAKSEGDRVGQTGSGDDSGSGDRVDEDPGWVEYSTLANLRLIRGPSVQELEARKNAMARWSSLGP 928
L P GRGAG GG Q WGGPLGRIVGQL++ P S S+ G + +I + GRGDS RGGVFGP GIGRGGMGM G G G+ ++ RRHS G GD GG A+KRGRG WKK+Y VIASV+ + +N D++Y ++E PTDMRPQ DVLAFKTLSLNEETWTPELS YR A V AFD ++ V LLP+ S + + LV KG ++ Q G++ I EE + P G G V SG +G +D A + + +GK ++D EG+ +EYS+LAN+R++RGPS+ ELE RK A+ +W+SLGP
Sbjct: 11 LVPSGRGAGXXXXXXXXXXXXXGGQQH-----WGGPLGRIVGQLRR--PEGESESNGGGAAAAIAPLEPEGRAGGRGDS------------TARGGVFGPGRGIGRGGMGMTRGGGAAGGGYANKNTRRHSTG----------DTANGD-----GGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENGDARYVVYEELPTDMRPQVCDVLAFKTLSLNEETWTPELSPYRTAEVTAFDTSSGLVRLLPA------------------SIEDDNKDGXXXXXXXLVNGCTKGHTAGQQQQ-GSSSGITESNTEEG------RVPTSNGHNQGGV---SGNSKGMEDPAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKARSTSSGKVGGAEEDRELREGEEE---------------------LEYSSLANVRVVRGPSMGELEKRKQALHKWNSLGP 407
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Match: A0A6H5L4H0_9PHAE (Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H0_9PHAE) HSP 1 Score: 144 bits (362), Expect = 2.990e-31 Identity = 150/439 (34.17%), Postives = 198/439 (45.10%), Query Frame = 0
Query: 514 LAPMGRGAGKRG--------GGAQESKPRGWGGPLGRIVGQLQQSGPVATSTSSVGESGTSIKDTCSGRGDSAGPDGVEACINRVERGGVFGPRGGIGRGGMGMASAFGRPGRGFG--HERRHSAGAGVKYADGRGSVDRGDRGSQGGGGARKRGRGEWKKEYSVIASVDKE------------KEKNDDSKYACFQEFPTDMRPQAGDVLAFKTLSLNEETWTPELSAYREATVAAFDPATDRVMLLPSGAPVVYNWQQRSGGGEPGSKAQETAETAAEHENVLVEVEGKGESSRQSPSSGNTLPINAGRVEEA--ESARGKQTPADAGAAMGTVALPSGPEEGGKDLVAQVTVDHSSVSAAGAGKPAPVDDDGAKSEGDRVGQTGSGDDSGSGDRVDEDPGWVEYSTLANLRLIRGPSVQELEARKNAMARWSSLGP 928
L P GRGAG GG Q WGGPLGRIVGQL++ P S S+ G + + + G G V GGVFGP GMGM G G + + RRHS G GD GG A+KRGRG WKK+Y VIASV+ + +N D++Y ++E PTDMRPQ DVLAFKTLSLNEETWTPELS YR A V AFD ++ V L P+ GG GS A + V + +G +S + ++P + G E ++G + PA A+ AG P D K+ G+ G ++ +E+ +EYS+LAN+R++RGPS+ EL+ RK A+ +W+SLGP
Sbjct: 474 LVPSGRGAGXXXXXXXXXXXGGQQH-----WGGPLGRIVGQLRR--PEGESESNGGGAAAATAPL-----EPEGRAGXXXXXXXV--GGVFGPGXXXXXXGMGMTRGGGFAGGRYADRNTRRHSTG----------HTANGD-----GGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASTE-----DDNKDGGGAGSGA--FVNDCTKGHTVGQQQQGSSSIIAESNTEEGSVPTSNGHNEGGFGGDSKGMEYPA----AVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSAE-PTTDGRNKARSTSSGEVGGAEEDRELREGEEE---LEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGP 868
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Match: A0A0P0Y9A7_ORYSJ (Coilin n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0Y9A7_ORYSJ) HSP 1 Score: 71.6 bits (174), Expect = 2.080e-11 Identity = 36/89 (40.45%), Postives = 60/89 (67.42%), Query Frame = 0
Query: 8 SPLAALRRIRVIF-SEKTGCRPLTSPKLLKRWVMIPPELAVIGDLAHHLARQLKRNRKTSASTLVLTLDGFVLPPTESLDLLRENDIVR 95
+P A R+R++F +++ R L L + W+++PPEL+ + DLA H+A + R R++ S ++L++DGFVLPP ES + R+NDI+R
Sbjct: 3 TPPAQAVRLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARF-RLRRSCPSCVILSIDGFVLPPFESTCIFRDNDIIR 90
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Match: A0A0E0RG41_ORYRU (Coilin n=7 Tax=Oryza TaxID=4527 RepID=A0A0E0RG41_ORYRU) HSP 1 Score: 75.1 bits (183), Expect = 4.990e-10 Identity = 39/100 (39.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query: 8 SPLAALRRIRVIF-SEKTGCRPLTSPKLLKRWVMIPPELAVIGDLAHHLARQLKRNRKTSASTLVLTLDGFVLPPTESLDLLRENDIVRLELLAQNKDTQ 106
+P A R+R++F +++ R L L + W+++PPEL+ + DLA H+A + R R++ S ++L++DGFVLPP ES + R+NDI+R++ A + TQ
Sbjct: 3 TPPAQAVRLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARF-RLRRSCPSCVILSIDGFVLPPFESTCIFRDNDIIRVKQKASKRITQ 101
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Match: B8BP67_ORYSI (Coilin n=3 Tax=Oryza sativa TaxID=4530 RepID=B8BP67_ORYSI) HSP 1 Score: 75.1 bits (183), Expect = 5.590e-10 Identity = 39/100 (39.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query: 8 SPLAALRRIRVIF-SEKTGCRPLTSPKLLKRWVMIPPELAVIGDLAHHLARQLKRNRKTSASTLVLTLDGFVLPPTESLDLLRENDIVRLELLAQNKDTQ 106
+P A R+R++F +++ R L L + W+++PPEL+ + DLA H+A + R R++ S ++L++DGFVLPP ES + R+NDI+R++ A + TQ
Sbjct: 135 TPPAQAVRLRLVFDNQRILRRSLRESGLRRCWLLLPPELSTVSDLAAHIAARF-RLRRSCPSCVILSIDGFVLPPFESTCIFRDNDIIRVKQKASKRITQ 233
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Match: A0A6G1BQ98_9ORYZ (Coilin n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1BQ98_9ORYZ) HSP 1 Score: 72.4 bits (176), Expect = 3.320e-9 Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query: 8 SPLAALRRIRVIFSEKTGCRPLTSPKLLKR-WVMIPPELAVIGDLAHHLARQLKRNRKTSASTLVLTLDGFVLPPTESLDLLRENDIVRLELLAQNKDTQ 106
+P A + R+R++F + R L+R W+++PPELA + DLA H+A + R R + ++L++DGFVLPP ES + R+NDI+R++ K TQ
Sbjct: 3 TPPAQVVRLRLVFDNQRLLRRSQRESGLRRCWLLLPPELATVADLAAHIAARF-RLRYSCPGCVILSIDGFVLPPFESTCIFRDNDIIRVKQKISKKITQ 101
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Match: A0A3L6G677_MAIZE (Coilin n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6G677_MAIZE) HSP 1 Score: 65.5 bits (158), Expect = 6.960e-8 Identity = 34/84 (40.48%), Postives = 55/84 (65.48%), Query Frame = 0
Query: 15 RIRVIFSEKTGCRPLTSPKLLKR-WVMIPPELAVIGDLAHHLARQLKRNRKTSASTLVLTLDGFVLPPTESLDLLRENDIVRLE 97
R+R+IF R + + L+R W+++ PELA + +LA H+A + R R+T +VL++DGF LPP ES + R+NDI+R++
Sbjct: 13 RLRLIFENSRLLRRVQRDEGLRRCWLLLSPELATVANLAAHVAARF-RLRRTCPRGVVLSMDGFTLPPFESTCIFRDNDIIRVK 95
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Match: UPI0019D6AB8C (coilin-like isoform X1 n=3 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6AB8C) HSP 1 Score: 67.0 bits (162), Expect = 1.580e-7 Identity = 33/84 (39.29%), Postives = 56/84 (66.67%), Query Frame = 0
Query: 15 RIRVIFSEKTGCRPLTSPKLLKR-WVMIPPELAVIGDLAHHLARQLKRNRKTSASTLVLTLDGFVLPPTESLDLLRENDIVRLE 97
R+R++F + R + L+R W+++ PELA + DLA H+A + R R+ +S ++L++DGF LPP ES + R+NDI+R++
Sbjct: 13 RLRLVFENRRLLRRTERDEGLRRCWLLLRPELATVADLASHVAARF-RLRRFCSSGIILSMDGFALPPFESTCIFRDNDIIRVK 95
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Match: A0A3L6GBK5_MAIZE (Coilin n=2 Tax=Zea mays TaxID=4577 RepID=A0A3L6GBK5_MAIZE) HSP 1 Score: 63.5 bits (153), Expect = 3.120e-7 Identity = 32/84 (38.10%), Postives = 54/84 (64.29%), Query Frame = 0
Query: 15 RIRVIFSEKTGCRPLTSPKLLKR-WVMIPPELAVIGDLAHHLARQLKRNRKTSASTLVLTLDGFVLPPTESLDLLRENDIVRLE 97
R+R++F + + + L+R W+++ PEL + DLA H+A + R R+T +VL++DGF LPP ES + R+NDI+R++
Sbjct: 13 RLRLLFENSRLLQRVQRDEGLRRCWLLLSPELGTVADLAAHVAARF-RLRRTCPRGVVLSMDGFTLPPFESTCIFRDNDIIRVK 95
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Match: A0A811QXN9_9POAL (Coilin n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811QXN9_9POAL) HSP 1 Score: 65.9 bits (159), Expect = 4.040e-7 Identity = 34/84 (40.48%), Postives = 55/84 (65.48%), Query Frame = 0
Query: 15 RIRVIFSEKTGCRPLTSPKLLKR-WVMIPPELAVIGDLAHHLARQLKRNRKTSASTLVLTLDGFVLPPTESLDLLRENDIVRLE 97
R+R++F R + + L+R W+++ PELA + DLA H+A + R R+T +VL++DGF LPP ES + R+NDI+R++
Sbjct: 13 RLRLLFENSRLLRRVQRDEGLRRCWLLLSPELATVADLAAHVAARF-RLRRTCPWGVVLSMDGFTLPPFESTCIFRDNDIIRVK 95 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19735.5506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig19735.5506.1 ID=prot_H-elongata_contig19735.5506.1|Name=mRNA_H-elongata_contig19735.5506.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1023bpback to top |