prot_H-elongata_contig197218.5503.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig197218.5503.1
Unique Nameprot_H-elongata_contig197218.5503.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length280
Homology
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BLAST of mRNA_H-elongata_contig197218.5503.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 9.630e-6
Identity = 23/38 (60.53%), Postives = 31/38 (81.58%), Query Frame = 0 
Query:    1 MCSGDGCSKYPSYGKAGSKKREYCAKHAMDGMINVHNK 38
             C  + C+K P+YG AGSKKRE+C++HA DGM+NV+NK
Sbjct:   63 QCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNK 100
[Close]
BLAST of mRNA_H-elongata_contig197218.5503.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 2.570e-5
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:    1 MCSGDGCSKYPSYGKAGSKKREYCAKHAMDGMINVHNK 38
             C    C+K P+YG AGSKKRE+C++HA DGM+NV+NK
Sbjct:    3 QCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNK 40
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig197218.5503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT00_9PHAE9.630e-660.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI73_ECTSI2.570e-560.53EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig197218contigH-elongata_contig197218:10..849 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig197218.5503.1mRNA_H-elongata_contig197218.5503.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig197218 7..1116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig197218.5503.1 ID=prot_H-elongata_contig197218.5503.1|Name=mRNA_H-elongata_contig197218.5503.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=280bp
MCSGDGCSKYPSYGKAGSKKREYCAKHAMDGMINVHNKMCAGDGCSKYPS
YRQAGSTKREYCAKHALEGIINVDKRKICGGDGCSKHPNYGKAETTKREY
CAKHALKGMVSFTSLMSANDSFSQVPANGKAGSTIREYCAEHASEGMVNV
LTKNGAGDKLSKHDRKAESTKREYCAELAFEGTINLTTGEMCAGDTCFKV
PNYGNAGSTKREQCAEHALEGIVNVPHKRPSLKKRVSKISSSPVSMSKRC
KTNNNAGAPFPGTALDVVSVKSEVSVKPK*
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