prot_H-elongata_contig196853.5488.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig196853.5488.1
Unique Nameprot_H-elongata_contig196853.5488.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Match: D8LC05_ECTSI (Actin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC05_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 2.030e-22
Identity = 65/135 (48.15%), Postives = 71/135 (52.59%), Query Frame = 0
Query:    7 EITVVVDVGSSSVKAGFSGEDLPRTVFPSVVAEDLSLATEELSTYRARRPE---------------------------------------------------------VLMVEPPLNERAQRQEIAAMMFETFKV 84
            E T+V+DVGSSS KAGFSGED+PR V PSV AEDL L+ EELSTYRARRPE                                                         VLMVEPPLNER+QRQE+AAMMFETFKV
Sbjct:    9 EATIVIDVGSSSAKAGFSGEDMPRAVCPSV-AEDLHLSAEELSTYRARRPESRECYLEYGNTGKDDEAVAAGDHPVRRGVLRDIDEMEKLMDNLFNFELAAYAGAHTPVLMVEPPLNERSQRQEMAAMMFETFKV 142          
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Match: A0A395IVZ5_9HELO (Uncharacterized protein n=1 Tax=Monilinia fructigena TaxID=38457 RepID=A0A395IVZ5_9HELO)

HSP 1 Score: 59.3 bits (142), Expect = 1.850e-8
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    1 MAASVNEITVVVDVGSSSVKAGFSGEDLPRTVFPSVVAEDLS-----LATEELSTYRARRPEVLMVEPPLNERAQRQEIAAMMFETFKV 84
            MA +++   +V+D GS +++AGF+GEDLP+  + S   +D+      +  E L T     P VL+ EPPLN R+ R   A ++FETF V
Sbjct:    1 MADTLHNAPIVLDNGSGTIRAGFAGEDLPKITWHSYRLDDMERIWEYVYGEGLKTLSEEHP-VLLTEPPLNPRSNRDTAAQILFETFNV 88          
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Match: A0A7S2D3H2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3H2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.820e-8
Identity = 43/121 (35.54%), Postives = 58/121 (47.93%), Query Frame = 0
Query:    6 NEITVVVDVGSSSVKAGFSGEDLPRTVFPSVV------------------AEDLS-------LATE--------------ELSTY----RARRPEVLMVEPPLNERAQRQEIAAMMFETFK 83
            +E  +V+D GS S K G+SGED PR++FPSVV                  AED S       + T+              EL TY          VL+ EPPLN++  R+++A +MFETFK
Sbjct:    2 DEGVIVIDAGSGSTKIGYSGEDTPRSIFPSVVDHPVLNEGTSRRPDVMDGAEDSSVHPVKRGMVTDWDQMERLWDHTFGTELRTYPETGSVNGVPVLLTEPPLNDKKSREQMARLMFETFK 122          
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Match: A0A6A2YM90_HIBSY (Actin n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YM90_HIBSY)

HSP 1 Score: 54.3 bits (129), Expect = 9.060e-7
Identity = 33/85 (38.82%), Postives = 45/85 (52.94%), Query Frame = 0
Query:   10 VVVDVGSSSVKAGFSGEDLPRTVFPSVVAEDLSLAT------------EELSTYRARRPEVLMVEPPLNERAQRQEIAAMMFETF 82
            +V D G+  VKAGFSG+D PR VFPS+V                    +E  +     P VL+ E PLN +A R+++  +MFETF
Sbjct:   10 LVCDNGTGMVKAGFSGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKLEEHP-VLLTEAPLNPKANREKMTQIMFETF 93          
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Match: F0Y9N8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9N8_AURAN)

HSP 1 Score: 54.7 bits (130), Expect = 9.260e-7
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   10 VVVDVGSSSVKAGFSGEDLPRTVFPSVVAEDLSLATEELSTYRARRPE 57
            +V+D GS+SVKAG+SGED PR+VFPS++ E  + A   L+    RRPE
Sbjct:    7 IVIDAGSASVKAGYSGEDTPRSVFPSILDEGGAEALSGLARSGGRRPE 54          
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Match: F0ZR57_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZR57_DICPU)

HSP 1 Score: 54.3 bits (129), Expect = 1.340e-6
Identity = 41/128 (32.03%), Postives = 55/128 (42.97%), Query Frame = 0
Query:    4 SVNEITVVVDVGSSSVKAGFSGEDLPRTVFPSVVAEDLSLA-----------------------------------------------TEELSTYRARRPEVLMVEPPLNERAQRQEIAAMMFETFKV 84
            S+ E T+VVD GS  VKAGF+GED PR++FPS+V   L  +                                               T EL    ++ P VL+ EPPLN +A R+ +   MFE F+V
Sbjct:  544 SIKEKTLVVDNGSGMVKAGFAGEDAPRSIFPSIVGYPLFNSVMHGMGKDKYIGEEAQAKRGVLSIKYPVEHGVITNWNDMESLWEYTFTTELRVDPSKHP-VLLTEPPLNPKANRERMVETMFEVFQV 670          
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Match: A0A068VJM6_COFCA (Uncharacterized protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068VJM6_COFCA)

HSP 1 Score: 52.8 bits (125), Expect = 3.180e-6
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    8 ITVVVDVGSSSVKAGFSGEDLPRTVFPSVV---------AEDLSLA---TEELSTYRARRPEVLMVEPPLNERAQRQEIAAMMFETFKV 84
            I +V+  G+ S KAGF+G+D P   FP +V         AE + L     +++     R   VL+ EPPLN +A RQ++  +MFETF V
Sbjct:    9 IPIVIYNGTRSTKAGFAGDDFPLASFPHLVGRTRHIIPLAEGVFLKYFLPQKMLHVDPRDHPVLLTEPPLNPKANRQKLTEIMFETFNV 97          
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Match: A0A7S3HID1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HID1_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 2.890e-5
Identity = 22/46 (47.83%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    6 NEITVVVDVGSSSVKAGFSGEDLPRTVFPSVVAEDLSLATEELSTY 51
            +E  +VVD+GSSSVKAG SGED+P  VFP+ +A+  + ++E +  +
Sbjct:    7 DESILVVDIGSSSVKAGHSGEDIPSYVFPATIAKGTNQSSESVEAF 52          
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Match: A0A7S3ZJY5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJY5_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 3.930e-5
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 0
Query:    9 TVVVDVGSSSVKAGFSGEDLPRTVFPSVVAE 39
            T+++DVGSSSVKAGF GEDLPR VFP+ V +
Sbjct:   14 TIILDVGSSSVKAGFCGEDLPRAVFPARVGD 44          
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Match: A0A812USG4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812USG4_9DINO)

HSP 1 Score: 50.1 bits (118), Expect = 3.940e-5
Identity = 40/125 (32.00%), Postives = 50/125 (40.00%), Query Frame = 0
Query:    8 ITVVVDVGSSSVKAGFSGEDLPRTVFPSVVA-------------------------------------------EDLS-----LATEELSTYRARRPEVLMVEPPLNERAQRQEIAAMMFETFKV 84
            + VVVD GS   K GFSGED PR VFPSVV                                            ED+      +   EL+      P VL+ EPP+N +A R+E+  +MFE F V
Sbjct:    2 VAVVVDTGSCLCKVGFSGEDAPRAVFPSVVGRVRHPMVMVGFHYRQSYVGEDALSKRGILRLRYPVDCGVVISWEDMEAIWSHIFYNELAVSPEDNP-VLLTEPPMNPKANREEMTRIMFEAFSV 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig196853.5488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LC05_ECTSI2.030e-2248.15Actin n=1 Tax=Ectocarpus siliculosus TaxID=2880 Re... [more]
A0A395IVZ5_9HELO1.850e-839.33Uncharacterized protein n=1 Tax=Monilinia fructige... [more]
A0A7S2D3H2_9STRA2.820e-835.54Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A6A2YM90_HIBSY9.060e-738.82Actin n=1 Tax=Hibiscus syriacus TaxID=106335 RepID... [more]
F0Y9N8_AURAN9.260e-754.17Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
F0ZR57_DICPU1.340e-632.03Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
A0A068VJM6_COFCA3.180e-638.20Uncharacterized protein n=1 Tax=Coffea canephora T... [more]
A0A7S3HID1_9STRA2.890e-547.83Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3ZJY5_9STRA3.930e-570.97Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A812USG4_9DINO3.940e-532.00Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.40coord: 6..47
e-value: 4.4E-10
score: 41.4
NoneNo IPR availableGENE3D3.30.420.40coord: 48..84
e-value: 1.7E-6
score: 29.5
NoneNo IPR availablePANTHERPTHR11937:SF156ACTIN DOMAIN-CONTAINING PROTEINcoord: 5..37
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 9..84
IPR004000Actin familyPFAMPF00022Actincoord: 9..40
e-value: 3.7E-9
score: 35.7
IPR004000Actin familyPANTHERPTHR11937ACTINcoord: 5..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig196853contigH-elongata_contig196853:52..911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig196853.5488.1mRNA_H-elongata_contig196853.5488.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig196853 52..973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig196853.5488.1 ID=prot_H-elongata_contig196853.5488.1|Name=mRNA_H-elongata_contig196853.5488.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MAASVNEITVVVDVGSSSVKAGFSGEDLPRTVFPSVVAEDLSLATEELST
YRARRPEVLMVEPPLNERAQRQEIAAMMFETFKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin