prot_H-elongata_contig19646.5479.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19646.5479.1
Unique Nameprot_H-elongata_contig19646.5479.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length323
Homology
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Match: D8LRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI6_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 3.670e-94
Identity = 147/236 (62.29%), Postives = 175/236 (74.15%), Query Frame = 0
Query:   75 EGGDSDGWEDVRVFYT------EEATFTADVKGSPPTRSG-FGPWVWLSTLWGLYAMWLKQSPILTKAFTSGVLALVGDMAAQCFEYQQK---GRSGPFLWDTRRVLAIVIDSMVITGPLLHAMYGLMEYFIPTSKGGFFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFWRAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHK 300
            EG D+ G  D+    T      E A+ T D+ G  P +S  FGPWVWLS +WG+YA WL++SP++ KA TSGVL L GDMAAQ FE+QQK   GR GPFL + RR+ A+ IDS++ITGP LHA+YGL+E  IPT  GGF PAA+HV +DTFV DP+FVASFFC TGMLESRPL+  ILPALRREFW AVQ SW VS  F P+Q+ +FRYL +EFRVLSVN  D+ WTS MSYFSHK
Sbjct:  135 EGDDAKGASDMNACSTQHRDRGERASSTVDMSGGEPKKSASFGPWVWLSAMWGMYAAWLRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNNRRLTAVAIDSILITGPALHALYGLLECLIPTVGGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRPLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSHK 370          
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Match: A0A6H5JK43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK43_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 6.920e-91
Identity = 139/214 (64.95%), Postives = 167/214 (78.04%), Query Frame = 0
Query:   91 EEATFTADVKGSPPTRSG-FGPWVWLSTLWGLYAMWLKQSPILTKAFTSGVLALVGDMAAQCFEYQQK---GRSGPFLWDTRRVLAIVIDSMVITGPLLHAMYGLMEYFIPTSKGGFFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFWRAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHK 300
            E A+ T ++ G    +S  FGPWVWLS +WG+YA WL++SP++ KA TSGVL L GDMAAQ FE+QQK   GR GPFL +TRR+ A+ IDS++ITGP LHA+YGL+E  IPT+ GGF PAA+HV +DTFV DP+FVASFFC TGMLESR L+  ILPALRREFW AVQ SW VS  F P+Q+ +FRYL +EFRVLSVN  D+ WTS MSYFSHK
Sbjct:  157 EGASPTVEMSGGASKKSARFGPWVWLSAMWGMYAAWLRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNTRRLTAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRSLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSHK 370          
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Match: A0A7S3XMM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMM5_HETAK)

HSP 1 Score: 187 bits (475), Expect = 5.370e-55
Identity = 99/206 (48.06%), Postives = 135/206 (65.53%), Query Frame = 0
Query:  100 KGSPPTRSGFGPWVWLSTLWGLYAMWLKQSPILTKAFTSGVLALVGDMAAQCFEY-QQKGRSG----PFLWDTRRVLAIVIDSMVITGPLLHAMYGLMEYFIPTSKGGFFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFWRAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHK 300
            +G  P  + F P ++L  L   Y+  LK +P+LTKA ++  +A  GD A Q +E+ ++    G     F+ D RR LA+++D + ITGP+LH  Y L+E+ +PT  GG  PA +HVA DTF+LDP+FV +FF TTG+ E RPL  D LP LRREF  A++ SW VS    PVQ+ SFRY+ V +RVL VN ID+ WT+ MS+FSHK
Sbjct:    5 QGGGPMATFFMPALFLLQL---YSSMLKNAPMLTKALSAAGIAASGDFATQIWEHWRETSNQGILVDKFILDRRRQLAVMMDGIFITGPILHLAYELLEHLVPTEGGGALPAVLHVAADTFLLDPLFVCTFFLTTGLFERRPLWADTLPRLRREFPAALRGSWSVSAVCLPVQFASFRYVPVRYRVLLVNCIDLAWTATMSFFSHK 207          
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Match: A0A836CPL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPL7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.160e-42
Identity = 67/120 (55.83%), Postives = 90/120 (75.00%), Query Frame = 0
Query:  181 TGPLLHAMYGLMEYFIPTSKGGFFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFWRAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHK 300
            TGP LH +YGL+E  IPT+ GG  PAA+HV LDTF+ DPVFV +FF TT + E + +K +++P L RE+W AV  SWGVS  FWP+Q+  FRYL ++ RVLS+N+ D+ WT+ +S+FSHK
Sbjct:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHK 120          
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Match: A0A6U1B1H0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B1H0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 4.100e-36
Identity = 78/205 (38.05%), Postives = 116/205 (56.59%), Query Frame = 0
Query:   98 DVKGSPPTRSGFGPWVWLSTLWGLYAMWLKQSPILTKAFTSGVLALVGDMAAQCFEYQQKGRSGPFLWDTRRVLAIVIDSMVITGPLLHAMYGLMEYFIPTSKGGFFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFWRAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHKHE 302
            +  G  P R G GP      L G Y   L  +PI TKA ++G +  +GDM AQ  E ++ G   PF  D  R  A  +D +++TGP LH  Y L+E  IP+  G  +   + + +D  + DP+ +A+FFCTT ++E +    D++  LR ++W      +GVSF   P+Q++SFRY+ V+ RVL VNL D+ WTS +S  SH  +
Sbjct:   52 EAAGEGPHRRG-GP----QELLGWYLALLSSAPIRTKAVSTGCIECLGDMIAQTAEARRTGL--PF--DRVRSFACFVDGLLVTGPSLHYGYALLERVIPSVGGPVWATLIQITVDELIFDPIDIATFFCTTSLIERK----DLVQRLRNDYWSTFWGGFGVSFACTPIQFISFRYMPVKTRVLVVNLCDLAWTSVVSVLSHAQD 243          
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Match: A0A1Z5JHC7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHC7_FISSO)

HSP 1 Score: 139 bits (349), Expect = 2.570e-35
Identity = 77/208 (37.02%), Postives = 118/208 (56.73%), Query Frame = 0
Query:  115 LSTLWGLYAMWLKQSPILTKAFTSGVLALVGDMAAQCFEYQQKGRSGPFLWDTRRVLAIVIDSMVITGPLLHAMYGLMEYFIPTSKGGFFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFWRAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHKHETGEEAAAKTPRDSSLADGVL 322
            L  L   Y +WL   P+LTK+ TS V+  VGD  AQ +E+         ++  RR LA +++ ++ +GPL+H  Y L E+ +P      F A +HV LD+ +LD VFV S F  TG+LE    K  +    +R+    ++ SW  S F  PV+ + FRYL V +RVL+VN++D++W + +S+ SHK   G+E  + T  + SL   +L
Sbjct:   83 LGALLQTYTLWLTTQPLLTKSITSAVMGCVGDAVAQRWEHHP-------IYSKRRGLAAMVEGLLWSGPLMHRAYSLFEHILPVGNNMGF-ALIHVLLDSLLLDSVFVTSAFWITGLLEGFSFK-QLRQQYQRDIGGTLKASWLTSLFLLPVEVVCFRYLPVTYRVLAVNVLDIVWDTVISFMSHKTR-GKELTSTTTDELSLQSPIL 280          
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Match: A0A7S4AQV4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AQV4_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.640e-30
Identity = 77/215 (35.81%), Postives = 117/215 (54.42%), Query Frame = 0
Query:  116 STLWGLYAMWLKQSPILTKAFTSGVLALVGDMAAQCFEYQQKGRSGP------------------------FL---WDTRRVLAIVIDSMVITGPLLHAMYGLMEYFIPTSKGG---FFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFWRAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHK 300
            S++   Y   L +SP+ TK  T+ ++A+VGD  AQ  E ++K  S P                        FL   +D RR L+ + ++M+I+GPLLH  Y LME FIPT+ GG    F A  H  +D FVLD +F+A+ F +TG+ E      +I+P  R++F+  +++ W       PVQ+L FR+  +  RVL VN+ID+ W + +SY  H+
Sbjct:  150 SSISSWYMDLLTRSPLWTKTVTTSLIAVVGDTFAQYIE-RRKNHSSPVEDKEDLNKDKDSAVSNSSIGSPFFLMKNYDKRRGLSCMGENMLISGPLLHFSYNLMEAFIPTTNGGRSAIFAALTHALIDNFVLDTIFLATMFVSTGIAEG--YVREIIPQFRKDFFPTLRMGWLAGICLLPVQFLLFRFFPLSLRVLGVNIIDIFWGAYVSYMVHR 361          
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Match: A0A7S3LFT8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFT8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 3.150e-30
Identity = 65/184 (35.33%), Postives = 107/184 (58.15%), Query Frame = 0
Query:  122 YAMWLKQSPILTKAFTSGVLALVGDMAAQCFE--YQQKGRSGPFL---WDTRRVLAIVIDSMVITGPLLHAMYGLMEYFIPTSKGGFFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFWRAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHK 300
            Y M L  +P++TK  T+GV+  +GD  AQ  E    Q+  + P +   +D RR L+ ++    I+GPL+H  Y L +  +P    G   A VHV  D+  LD +FVA+ +  TG +E    +  ++P LR+++   ++ SW  S F  PV+++ FR+L + +RVL+VN ID+IW   +S+ +H+
Sbjct:  179 YMMQLSVNPLVTKGITAGVIGSLGDFLAQSLENFLHQRKNNAPVVHSKYDPRRGLSTLLYGFFISGPLMHFAYDLFDRVLPIHGNG--AALVHVLADSIFLDAIFVAATYIVTGRMEGYKFR-QVMPQLRKDYLPTLKASWATSIFLMPVEFVCFRFLPLNYRVLAVNFIDLIWDGVISFMAHR 359          
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Match: A0A448Z075_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z075_9STRA)

HSP 1 Score: 126 bits (317), Expect = 5.320e-30
Identity = 78/214 (36.45%), Postives = 112/214 (52.34%), Query Frame = 0
Query:  116 STLWGLYAMWLKQSPILTKAFTSGVLALVGDMAAQCFEYQQ------KGRSG----------------PFLW----DTRRVLAIVIDSMVITGPLLHAMYGLMEYFIPTSKGG---FFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFWRAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHK 300
            S+L   Y   L  SP+ TK  T+ VLA+ GD  AQ  E  +      +G  G                PF W    D RR ++I+ ++M+I+GPLLH  Y  ME  IPT+ GG   F  A  H  +D F+LD +F+A  F TTG+ E      +I+P  +++F+  ++  W       PVQ+L FR+L +  RVL VN+IDM W + +SY  H+
Sbjct:  146 SSLSARYMDLLACSPLWTKTVTTSVLAVAGDSIAQYIETHKFSPSVVEGDEGFGKTKDVAVSAFSVGSPFSWLKDYDRRRGISILGENMLISGPLLHFSYNFMEQLIPTNGGGKSAFLAALSHSLIDNFILDTIFLAIMFVTTGIAEG--YVQEIIPQFKKDFFPTLRTGWIAGICLLPVQFLIFRFLPLSLRVLGVNIIDMFWGAYVSYMVHR 357          
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Match: A0A1Z5K2M4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2M4_FISSO)

HSP 1 Score: 114 bits (286), Expect = 2.790e-27
Identity = 65/182 (35.71%), Postives = 104/182 (57.14%), Query Frame = 0
Query:  141 LALVGDMAAQCFEYQQKGRSGPFLWDTRRVLAIVIDSMVITGPLLHAMYGLMEYFIPTSKGGFFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFWRAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHKHETGEEAAAKTPRDSSLADGVL 322
            +  VGD  AQ +E+         ++  RR +A +++ ++ +GPL+H  Y L E+ +P      F A +HV LD+ +LD VFV S F  TG+LE    K  +    +R+    ++ SW  S F  PV+ + FRYL V +RVL+VN++D++W + +S+ SHK   G+E A+ T  +S L   +L
Sbjct:    1 MGCVGDAVAQRWEHHP-------VYSKRRGVAAMVEGLLWSGPLMHLAYSLFEHILPIGNNMGF-ALIHVLLDSLLLDSVFVTSAFWITGLLEGFSFK-QLRQQYQRDIGGTLKASWLTSLFLLPVEVVCFRYLPVTYRVLAVNVLDIVWDTVISFMSHKTR-GKELASTTTDESLLQSPIL 172          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19646.5479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRI6_ECTSI3.670e-9462.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK43_9PHAE6.920e-9164.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XMM5_HETAK5.370e-5548.06Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CPL7_9STRA1.160e-4255.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1B1H0_9STRA4.100e-3638.05Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5JHC7_FISSO2.570e-3537.02Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S4AQV4_9STRA1.640e-3035.81Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S3LFT8_9STRA3.150e-3035.33Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A448Z075_9STRA5.320e-3036.45Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1Z5K2M4_FISSO2.790e-2735.71Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 230..295
e-value: 1.3E-12
score: 47.8
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 114..302
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 114..302
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 150..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..297
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 298..323
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 126..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 192..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 229..248
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 267..277
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..266
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..228
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..125
NoneNo IPR availableTMHMMTMhelixcoord: 206..228
NoneNo IPR availableTMHMMTMhelixcoord: 169..191
NoneNo IPR availableTMHMMTMhelixcoord: 249..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19646contigH-elongata_contig19646:2758..4387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19646.5479.1mRNA_H-elongata_contig19646.5479.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19646 2758..4387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19646.5479.1 ID=prot_H-elongata_contig19646.5479.1|Name=mRNA_H-elongata_contig19646.5479.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=323bp
RKRCRERGGRHSSFSGLWRFGFGRDTRVVASFPFRLVVHAYGESRRGVES
WLIWSGGGNNNGSIPRGDPGGTDDEGGDSDGWEDVRVFYTEEATFTADVK
GSPPTRSGFGPWVWLSTLWGLYAMWLKQSPILTKAFTSGVLALVGDMAAQ
CFEYQQKGRSGPFLWDTRRVLAIVIDSMVITGPLLHAMYGLMEYFIPTSK
GGFFPAAVHVALDTFVLDPVFVASFFCTTGMLESRPLKTDILPALRREFW
RAVQVSWGVSFFFWPVQYLSFRYLSVEFRVLSVNLIDMIWTSAMSYFSHK
HETGEEAAAKTPRDSSLADGVLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22