prot_H-elongata_contig195439.5449.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig195439.5449.1
Unique Nameprot_H-elongata_contig195439.5449.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length113
Homology
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.270e-47
Identity = 79/113 (69.91%), Postives = 91/113 (80.53%), Query Frame = 0
Query:    1 MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDESFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGTK 113
            MLANAP+SF+ GLQGL A STMEAELVA+AL MKEAVFCSNM+ ELGF + F  +P+Y DN   LH  GNRS+S R KHIALR+FF++ELV EGKISIHY  TED LA +GTK
Sbjct:   81 MLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTK 193          
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 3.750e-46
Identity = 80/113 (70.80%), Postives = 92/113 (81.42%), Query Frame = 0
Query:    1 MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDESFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGTK 113
            MLANAP+SF+ GLQGL A STMEAELVA+AL MKEAVFCSNM+ ELGF + F  +P+Y DN   LH  GNRS+S R KHIALR+FF++ELV EGKISIHY  TED LAD+GTK
Sbjct:  306 MLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTK 418          
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 2.050e-45
Identity = 81/113 (71.68%), Postives = 94/113 (83.19%), Query Frame = 0
Query:    1 MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDESFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGTK 113
            MLANAP+SF+ GLQGL A STMEAELVA+AL MKEAVFCSNM+ ELGF + F  +P+Y DN   LH  GNRS+S R KHIALR+FF++ELV EGKISIHYV+TED LAD+GTK
Sbjct:  866 MLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTK 978          
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.990e-44
Identity = 80/113 (70.80%), Postives = 92/113 (81.42%), Query Frame = 0
Query:    1 MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDESFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGTK 113
            MLANAP+SF+ GLQGL A STMEAELVA+AL MKEAVFCSNM+ ELG  + F  +P+Y DN   LH  GNRS+S R KHIALR+FF++ELV EGKISIHYV TED LAD+GTK
Sbjct:  527 MLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTK 639          
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 2.700e-42
Identity = 78/113 (69.03%), Postives = 91/113 (80.53%), Query Frame = 0
Query:    1 MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDESFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGTK 113
            +LANAP+SF+ GLQGL A STMEAELVA+AL M EAVF SNM+ ELGF + F  +P+Y DN   LH  GNRS+S R KHIALR+FF++ELV EGKISIHYV TED LAD+GTK
Sbjct: 1535 VLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTK 1647          
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 5.940e-41
Identity = 71/113 (62.83%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    1 MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDESFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGTK 113
            ML NAP+SFK G+QG  A STMEAEL+A+AL MKEAVFCSN++ ELG  + F  VPLY DN   LH  GNRS+S R KHIALR+F+++EL+ EG+ISIHY+ T+  +AD+GTK
Sbjct: 1036 MLGNAPVSFKSGIQGPTAMSTMEAELIASALAMKEAVFCSNILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTK 1148          
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Match: A0A6H5J9N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N2_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 1.150e-40
Identity = 74/113 (65.49%), Postives = 88/113 (77.88%), Query Frame = 0
Query:    1 MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDESFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGTK 113
            ML +A ++FK GLQ L AQSTMEAELVAAAL MKEAVFCSN++ ELGF + F  VPLY DN   LH  GNRS+S R KHIALR+FF+++LV EGKI IH+V T+   AD+GTK
Sbjct:  224 MLYDALMAFKSGLQSLTAQSTMEAELVAAALAMKEAVFCSNILTELGFGKEFAQVPLYCDNTATLHSLGNRSHSSRTKHIALRFFFIRDLVSEGKIFIHFVPTDSNPADIGTK 336          
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.320e-39
Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 0
Query:    1 MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDESFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGTK 113
            ML +AP+S K G+QG  A STMEAEL+A+AL MKEAVFCSNM+ ELGF + F  VPLY DN   LH  GNRS+S R  HIALR+F+++ELV EG+ISIHYV T+  LAD+GTK
Sbjct: 1064 MLEHAPVSLKSGIQGPAAISTMEAELIASALAMKEAVFCSNMLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTK 1176          
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 2.440e-39
Identity = 71/113 (62.83%), Postives = 91/113 (80.53%), Query Frame = 0
Query:    1 MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDESFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGTK 113
            M++ AP+SFK GLQ L A ST+EAELVAAAL MKE +FC+NM+ ELGF   F S PLYI N   LHV GN+++S R KH+ALR+F+++E+V+EG+ISIHY+ TED LAD+GTK
Sbjct:  560 MMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTK 671          
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.100e-37
Identity = 71/113 (62.83%), Postives = 85/113 (75.22%), Query Frame = 0
Query:    1 MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDESFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHYVKTEDQLADLGTK 113
            ML +AP++FK GLQ L  QSTME ELVAAAL +KEAVFCSN++ ELGF +    VPLY DN   LH  GNRSYS   KHIALR+FF++ELV EG+I+IHYV  +   AD+GTK
Sbjct:  589 MLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTK 701          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig195439.5449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMK0_9PHAE1.270e-4769.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE3.750e-4670.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE2.050e-4571.68Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JME8_9PHAE1.990e-4470.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE2.700e-4269.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K129_9PHAE5.940e-4162.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9N2_9PHAE1.150e-4065.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBV6_9PHAE1.320e-3964.60Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KBU1_9PHAE2.440e-3962.83CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JG39_9PHAE1.100e-3762.83Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig195439contigH-elongata_contig195439:809..1147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig195439.5449.1mRNA_H-elongata_contig195439.5449.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig195439 797..1147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig195439.5449.1 ID=prot_H-elongata_contig195439.5449.1|Name=mRNA_H-elongata_contig195439.5449.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bp
MLANAPISFKVGLQGLIAQSTMEAELVAAALTMKEAVFCSNMILELGFDE
SFGSVPLYIDNMLALHVAGNRSYSPRAKHIALRYFFVQELVEEGKISIHY
VKTEDQLADLGTK
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