prot_H-elongata_contig19496.5427.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig19496.5427.1
Unique Name	prot_H-elongata_contig19496.5427.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	156

Homology

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BLAST of mRNA_H-elongata_contig19496.5427.1 vs. uniprot
Match: D8LE62_ECTSI (GPI inositol-deacylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE62_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 2.600e-27
Identity = 67/153 (43.79%), Postives = 84/153 (54.90%), Query Frame = 0

Query:    1 MPLLEEVD----EGSDSVDKLKAEHRRKRHKGRKKSKKNTKGGSIVG--VLVVAIAIVGVGLWSRASVLNRDSNSCKMTMSRPKYVPLAVPSYLAGGEGRGGEVGDELTPGYGYRLMRYIDGKLPEEDRSKPLKPKGFPVLFVPGHVGSYKQA 147
            MPLLEEVD    + ++  + LKA HR                  +    V   A  ++G G W+R+   +  SNSCKMT SRP+YV L V  Y  G      E   E  PGY YRLMRY+D  LP  +++ PLKP G PVLFVPGH+GSY+QA
Sbjct:    1 MPLLEEVDPEAGDSAEGAEGLKAAHRXXXXXXXXXXXXXXXXXGVAAFRVFFEAAVVLGFGFWARSKGTDSRSNSCKMTFSRPEYVHLPVAGYPTG------EAAGEEVPGYQYRLMRYMDRALPASEKADPLKPAGVPVLFVPGHLGSYEQA 147

[Close]

BLAST of mRNA_H-elongata_contig19496.5427.1 vs. uniprot
Match: A0A1B6CQG4_9HEMI (GPI inositol-deacylase n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6CQG4_9HEMI)

HSP 1 Score: 53.9 bits (128), Expect = 1.610e-5
Identity = 34/110 (30.91%), Postives = 60/110 (54.55%), Query Frame = 0

Query:   40 SIVGVLVVAIAIVGVGLWSRASVLNRDSNSCKMTM--SRPKYVPLAVPSYLAGGEGRGGEVGDELTPGYG-YRLMRYIDGKLPEEDRSKPLKPKGFPVLFVPGHVGSYKQ 146
            SI+ +L   ++ + VG +++  + +R+ N+C+MT     P++V +++P                +T  Y  Y L  Y +G+    D+++ +K  G PVLF+PGH GSYKQ
Sbjct:   19 SIISLLFYLLSFI-VG-YTQIRIRSREINNCEMTYMYEYPQFVRISLPP--------------NITTNYRRYGLYAYAEGRF--IDKARQMKFDGIPVLFIPGHSGSYKQ 110

[Close]

BLAST of mRNA_H-elongata_contig19496.5427.1 vs. uniprot
Match: F2U7U3_SALR5 (GPI inositol-deacylase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7U3_SALR5)

HSP 1 Score: 53.5 bits (127), Expect = 2.560e-5
Identity = 35/106 (33.02%), Postives = 48/106 (45.28%), Query Frame = 0

Query:   46 VVAIAIVGVGLWSR-----ASVLNRDSNSCKMTMSRPKYVPLAVPSYLAGGEGRGGEVGDELTPGYGYRLMRYIDGKLPEEDRSKPLKPKGFPVLFVPGHVGSYKQ 146
            VV + +V V LW       ASV     N C MT   P Y  L  P +                    YRL+ Y       ++R++P+  +G PVLF+PGH+GSY+Q
Sbjct:   10 VVVLCLVAVPLWMAHHQRYASV----ENKCHMTYMYPSYTALEAPHHPR------------------YRLLVY-------KERARPIALRGRPVLFIPGHLGSYEQ 86

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig19496.5427.1 vs. uniprot

BLAST of mRNA_H-elongata_contig19496.5427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LE62_ECTSI	2.600e-27	43.79	GPI inositol-deacylase n=2 Tax=Ectocarpus TaxID=28...	[more]
A0A1B6CQG4_9HEMI	1.610e-5	30.91	GPI inositol-deacylase n=1 Tax=Clastoptera arizona...	[more]
F2U7U3_SALR5	2.560e-5	33.02	GPI inositol-deacylase n=1 Tax=Salpingoeca rosetta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039529	GPI inositol-deacylase	PANTHER	PTHR15495	NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED	coord: 42..147
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..38
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 39..58
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 59..155
None	No IPR available	TMHMM	TMhelix		coord: 41..63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig19496	contig	H-elongata_contig19496:934..1648 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig19496.5427.1	mRNA_H-elongata_contig19496.5427.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig19496 934..1648 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig19496.5427.1 ID=prot_H-elongata_contig19496.5427.1|Name=mRNA_H-elongata_contig19496.5427.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MPLLEEVDEGSDSVDKLKAEHRRKRHKGRKKSKKNTKGGSIVGVLVVAIA
IVGVGLWSRASVLNRDSNSCKMTMSRPKYVPLAVPSYLAGGEGRGGEVGD
ELTPGYGYRLMRYIDGKLPEEDRSKPLKPKGFPVLFVPGHVGSYKQASEG
GMCLS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039529	PGAP1/BST1