prot_H-elongata_contig19484.5421.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19484.5421.1
Unique Nameprot_H-elongata_contig19484.5421.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length138
Homology
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Match: D8LPM3_ECTSI (Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM3_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 1.320e-52
Identity = 88/139 (63.31%), Postives = 114/139 (82.01%), Query Frame = 0
Query:    1 MVSAHSKT--ARTIARDVRGKHFVVTGANTGIGYVTSRELAKMGGKVTMACRSAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIVSFSRRLKEARSRVNVLINNAGVMGFAEKMETANGFEM 137
            M SAHS    A+++ +D+RGKHFVVTGANTG+GY T+RELAKMG  VT+ACRSAERG+ AIDK++ EAL KPV++G DLLEGL DVDVRLE+LDL SL S+++F++R K + ++V+VLINNAG+M   E+ ET +G EM
Sbjct:    1 MGSAHSTNCKAKSVCQDLRGKHFVVTGANTGLGYATTRELAKMGAAVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLLEGLTDVDVRLEVLDLGSLQSVIAFAQRFKASGTKVDVLINNAGIMAIPERRETVDGLEM 139          
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Match: D8LP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP30_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 2.830e-50
Identity = 83/135 (61.48%), Postives = 114/135 (84.44%), Query Frame = 0
Query:    3 SAHSKTARTIARDVRGKHFVVTGANTGIGYVTSRELAKMGGKVTMACRSAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIVSFSRRLKEARSRVNVLINNAGVMGFAEKMETANGFEM 137
            S  ++ A+++ +D+RGKHF+VTGANTG+GYVT+RELAKMG KVT+ACRSAERG+ AIDK++ EAL KPV++G DLL+GL +VDVRLE+LDL SL S+V+F++R K + ++V+VL+NNAG+ G   + ETA+G EM
Sbjct:  154 SKATRKAKSLRQDLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKMKAEALEKPVKEGVDLLDGLTEVDVRLEVLDLGSLQSVVAFAQRFKASGTKVDVLVNNAGIFGVPNRRETADGLEM 288          
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Match: A0A6H5JP92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP92_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.350e-49
Identity = 80/135 (59.26%), Postives = 111/135 (82.22%), Query Frame = 0
Query:    3 SAHSKTARTIARDVRGKHFVVTGANTGIGYVTSRELAKMGGKVTMACRSAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIVSFSRRLKEARSRVNVLINNAGVMGFAEKMETANGFEM 137
            S  ++ A+++ +D+RGKHF+VTGANTG+GYVT+RELAKMG KVT+ACRSAERG+ AIDKL+ E L KP ++G DLL+GL +VDVRLE+LDL SL S+++F++  K + ++V+VL+NNAG+ G   + ETA+G EM
Sbjct:    7 SKATRKAKSLRQDLRGKHFIVTGANTGLGYVTARELAKMGAKVTLACRSAERGQQAIDKLKAEVLEKPAKEGVDLLDGLTEVDVRLEVLDLGSLRSVIAFAQGFKASGTKVDVLVNNAGIFGVPNRRETADGLEM 141          
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Match: A0A2G8K0H6_STIJA (Putative retinol dehydrogenase 12 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8K0H6_STIJA)

HSP 1 Score: 97.1 bits (240), Expect = 1.730e-21
Identity = 50/117 (42.74%), Postives = 84/117 (71.79%), Query Frame = 0
Query:   21 FVVTGANTGIGYVTSRELAKMGGKVTMACRSAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIVSFSRRLKEARSRVNVLINNAGVMGFAEKMETANGFEM 137
            F+VTGANTGIGY+T++ +A++GG+V MACRS ++  +AI +++QE   +   +G+    G+ +++++   LDLSSL S ++F+R+ KE    ++VLI NAG++G  +K  T +GFE+
Sbjct:   18 FIVTGANTGIGYMTTKTIAQLGGRVIMACRSEQKATDAIQRMKQET--QEDFKGSKGSNGIPELNIQYMNLDLSSLESTINFARQFKETGLPLHVLICNAGLLGPQKKALTDDGFEL 132          
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Match: A0A4V2DYL4_9MICO (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=2 Tax=unclassified Cryobacterium TaxID=2649013 RepID=A0A4V2DYL4_9MICO)

HSP 1 Score: 92.8 bits (229), Expect = 6.460e-20
Identity = 51/123 (41.46%), Postives = 78/123 (63.41%), Query Frame = 0
Query:   15 DVRGKHFVVTGANTGIGYVTSRELAKMGGKVTMACRSAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIVSFSRRLKEARSRVNVLINNAGVMGFAEKMETANGFEM 137
            D+ G   VVTGAN+G+G+VT+ +LA  G  VT+A R A RG  A++++R               +GL D D+ + +LDL+SL SI +F+  +  A  R+++L+NNAGVM   ++ +TA+GFEM
Sbjct:   16 DLTGTTAVVTGANSGLGFVTATQLAAHGASVTLAVRDASRGAAAVERMR---------------DGLPDADLTVRVLDLASLASIAAFTDEVTAATGRLDLLVNNAGVMNLPQR-QTADGFEM 122          
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Match: UPI0018C9A208 (oxidoreductase n=1 Tax=Actinomadura viridis TaxID=58110 RepID=UPI0018C9A208)

HSP 1 Score: 92.4 bits (228), Expect = 7.540e-20
Identity = 56/123 (45.53%), Postives = 77/123 (62.60%), Query Frame = 0
Query:   15 DVRGKHFVVTGANTGIGYVTSRELAKMGGKVTMACRSAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIVSFSRRLKEARSRVNVLINNAGVMGFAEKMETANGFEM 137
            D+RG+  VVTGAN+GIGY T+ ELA+ G  V +ACRSAERG+ A D++R E               + D ++ L  LDL+ L S+  F+RR  +A   ++VL+NNAGVM    +  TA+GFEM
Sbjct:   10 DLRGRRAVVTGANSGIGYHTALELARHGASVVLACRSAERGQAAHDRMRAE---------------VPDAEIELAALDLADLASVREFARR--QAGRPLDVLVNNAGVMALPRR-GTADGFEM 114          
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Match: F8D5S4_HALXS (Short-chain dehydrogenase/reductase SDR n=2 Tax=Halopiger TaxID=387342 RepID=F8D5S4_HALXS)

HSP 1 Score: 92.8 bits (229), Expect = 7.640e-20
Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 0
Query:   15 DVRGKHFVVTGANTGIGYVTSRELAKMGGKVTMACRSAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIVSFSRRLKEARSRVNVLINNAGVMGFAEKMETANGFE 136
            D  G+ FV+TGAN+GIG   +RELA+ GG V MACRS ERG++A D +R               E + D D+ +E LDL+ L S+ +F+ RL++  + ++ LINNAGVM    + ETA+GFE
Sbjct:   10 DQSGRTFVITGANSGIGLEATRELARNGGAVVMACRSVERGEDAADDVR---------------EDVPDADLHVEELDLADLESVRAFADRLQDDAT-IDALINNAGVMAIP-RSETADGFE 114          
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Match: UPI001CBFA325 (oxidoreductase n=1 Tax=Streptomyces huiliensis TaxID=2876027 RepID=UPI001CBFA325)

HSP 1 Score: 92.0 bits (227), Expect = 1.160e-19
Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 0
Query:   17 RGKHFVVTGANTGIGYVTSRELAKMGGKVTMACRSAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIVSFSRRLKEARSRVNVLINNAGVMGFAEKMETANGFE 136
            +G+  VVTGAN+GIGYVTSRELA+ G +V +ACR A RG+ A D LR++               +   DVRL  LDL+ L SI SF+  L E   R+++L+NNAGVM    +  TA+GFE
Sbjct:   14 KGRTAVVTGANSGIGYVTSRELARRGARVVLACRDATRGRAAEDLLRRQ---------------VPGADVRLARLDLADLESIRSFAAELPE--ERLDLLVNNAGVMALPRR-RTADGFE 115          
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Match: A0A8A2V7G2_9EURY (SDR family oxidoreductase n=1 Tax=Haloterrigena sp. KZCA68 TaxID=2816475 RepID=A0A8A2V7G2_9EURY)

HSP 1 Score: 92.0 bits (227), Expect = 1.270e-19
Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 0
Query:   15 DVRGKHFVVTGANTGIGYVTSRELAKMGGKVTMACRSAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIVSFSRRLKEARSRVNVLINNAGVMGFAEKMETANGFE 136
            D  G+  VVTGAN+GIG   SRELA+ G  V MACRS ERG++A D++R+E               + D D+R+E  DL+ L S+ +F+ RL  A   ++VL+NNAGVM    + ETA+GFE
Sbjct:   10 DQHGRTVVVTGANSGIGLEASRELARNGATVIMACRSTERGEDAADEIREE---------------VPDADLRVEACDLADLDSVRAFADRL--ADESIDVLLNNAGVMAIP-RSETADGFE 113          
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Match: UPI001F5C861C (oxidoreductase n=1 Tax=Streptomyces sp. MST-110588 TaxID=2833628 RepID=UPI001F5C861C)

HSP 1 Score: 92.0 bits (227), Expect = 1.270e-19
Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 0
Query:   15 DVRGKHFVVTGANTGIGYVTSRELAKMGGKVTMACRSAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIVSFSRRLKEARS-RVNVLINNAGVMGFAEKMETANGFEM 137
            D  G+  VVTGAN+GIGY+T+RELA+ G +  +ACRS  RG+ A+D+LR E               +   DV+L +LDL+ L S+ +F+  L +    R+++LINNAGVM    +  TA+GFEM
Sbjct:   11 DQTGRSAVVTGANSGIGYITARELARRGARTVLACRSETRGRAAVDRLRAE---------------VPHADVQLRLLDLADLTSVRAFAAELADFDGGRLDLLINNAGVMALPHR-RTADGFEM 118          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19484.5421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPM3_ECTSI1.320e-5263.31Short-chain dehydrogenase n=2 Tax=Ectocarpus TaxID... [more]
D8LP30_ECTSI2.830e-5061.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP92_9PHAE1.350e-4959.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2G8K0H6_STIJA1.730e-2142.74Putative retinol dehydrogenase 12 n=1 Tax=Stichopu... [more]
A0A4V2DYL4_9MICO6.460e-2041.463-oxoacyl-[acyl-carrier-protein] reductase FabG n=... [more]
UPI0018C9A2087.540e-2045.53oxidoreductase n=1 Tax=Actinomadura viridis TaxID=... [more]
F8D5S4_HALXS7.640e-2045.08Short-chain dehydrogenase/reductase SDR n=2 Tax=Ha... [more]
UPI001CBFA3251.160e-1947.50oxidoreductase n=1 Tax=Streptomyces huiliensis Tax... [more]
A0A8A2V7G2_9EURY1.270e-1945.90SDR family oxidoreductase n=1 Tax=Haloterrigena sp... [more]
UPI001F5C861C1.270e-1943.55oxidoreductase n=1 Tax=Streptomyces sp. MST-110588... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 111..122
score: 44.97
coord: 20..37
score: 35.87
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 19..128
e-value: 2.1E-11
score: 43.7
NoneNo IPR availableGENE3D3.40.50.720coord: 9..136
e-value: 1.2E-24
score: 88.6
NoneNo IPR availablePANTHERPTHR24320:SF148coord: 7..137
NoneNo IPR availablePANTHERPTHR24320FAMILY NOT NAMEDcoord: 7..137
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 15..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19484contigH-elongata_contig19484:2483..3589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19484.5421.1mRNA_H-elongata_contig19484.5421.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19484 1895..3589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19484.5421.1 ID=prot_H-elongata_contig19484.5421.1|Name=mRNA_H-elongata_contig19484.5421.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp
MVSAHSKTARTIARDVRGKHFVVTGANTGIGYVTSRELAKMGGKVTMACR
SAERGKNAIDKLRQEALAKPVEQGADLLEGLQDVDVRLEILDLSSLHSIV
SFSRRLKEARSRVNVLINNAGVMGFAEKMETANGFEM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf