prot_H-elongata_contig19474.5416.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig19474.5416.1
Unique Name	prot_H-elongata_contig19474.5416.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	86

Homology

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BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Match: D8LBI3_ECTSI (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI3_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 5.340e-39
Identity = 68/86 (79.07%), Postives = 78/86 (90.70%), Query Frame = 0

Query:    1 KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFREGTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ 86
            KRPGLDAFLKEM+Q YEIV+FTDS GGLADEWIT+MDP G  ISQRV+R+GTRYIDGKYVKDLSALNRPLE+ +++DDN DCI +Q
Sbjct:  267 KRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGT-ISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQ 351

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BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Match: A0A168L0T1_MUCCL (Mitochondrial import inner membrane translocase subunit TIM50 (Fragment) n=1 Tax=Mucor lusitanicus CBS 277.49 TaxID=747725 RepID=A0A168L0T1_MUCCL)

HSP 1 Score: 100 bits (249), Expect = 1.400e-25
Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 0

Query:    1 KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFREGTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ 86
            KRPG+D FL  ++QFYEIVIFT  S   A   + K+DP  QY   R++RE TRY+DGKYVKDLS LNR L KV+++D NPD   LQ
Sbjct:    1 KRPGVDYFLSYLSQFYEIVIFTSQSSMNAMPLLDKLDPY-QYAMYRLYREATRYVDGKYVKDLSHLNRDLSKVIIMDSNPDSFSLQ 85

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BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Match: A0A3P7L6M4_DIBLA (Mitochondrial import inner membrane translocase subunit TIM50 (Fragment) n=1 Tax=Dibothriocephalus latus TaxID=60516 RepID=A0A3P7L6M4_DIBLA)

HSP 1 Score: 96.7 bits (239), Expect = 4.280e-23
Identity = 45/86 (52.33%), Postives = 61/86 (70.93%), Query Frame = 0

Query:    1 KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFREGTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ 86
            KRP L+ FL++++ FYE+V FT+ S       + ++DP GQYI  R+FRE TRY +GK++KDLS LNR L +V+LVD NPD   LQ
Sbjct:   28 KRPALELFLQQLSPFYEVVTFTNESAMTGMPILAQLDPQGQYIHYRLFREATRYRNGKHIKDLSCLNRDLSRVILVDWNPDAATLQ 113

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BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Match: A0A0B7NSD9_9FUNG (Mitochondrial import inner membrane translocase subunit TIM50 n=5 Tax=Mucoraceae TaxID=34489 RepID=A0A0B7NSD9_9FUNG)

HSP 1 Score: 100 bits (249), Expect = 4.480e-23
Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 0

Query:    1 KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFREGTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ 86
            KRPG+D FL  ++QFYEIVIFT  S   A   + K+DP  QY   R++RE TRY+DGKYVKDLS LNR L KV+++D NPD   LQ
Sbjct:  181 KRPGVDYFLSYLSQFYEIVIFTSQSSMNAMPLLDKLDPY-QYAMYRLYREATRYVDGKYVKDLSHLNRDLSKVIIMDSNPDSFSLQ 265

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BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Match: A0A2G4SS92_RHIZD (Mitochondrial import inner membrane translocase subunit TIM50 n=4 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SS92_RHIZD)

HSP 1 Score: 98.2 bits (243), Expect = 2.940e-22
Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = 0

Query:    1 KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFREGTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ 86
            KRPG+D FL  ++QFYEIV+FT      A   + K+DP  QY   R++R+GTRYIDGKYVKDLS LNR L KV+++D NP+   LQ
Sbjct:  175 KRPGVDYFLSYLSQFYEIVVFTSQPAMNAAPILDKLDPY-QYAMYRLYRDGTRYIDGKYVKDLSYLNRDLSKVIIMDSNPESFSLQ 259

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BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Match: A0A654GRC9_9CEST (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654GRC9_9CEST)

HSP 1 Score: 94.4 bits (233), Expect = 4.800e-22
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 0

Query:    1 KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFREGTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ 86
            KRP L+ FL++++ FYE+V FT+ S       + ++DP  QYI  R+FRE TRY +GK++KDLS LNR L +V+LVD NPD   LQ
Sbjct:   44 KRPALELFLQQLSPFYEVVTFTNESAMTGMPILAQLDPQAQYIHYRLFREATRYRNGKHIKDLSCLNRDLSRVILVDWNPDAATLQ 129

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BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Match: A0A1X2HI85_SYNRA (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HI85_SYNRA)

HSP 1 Score: 97.4 bits (241), Expect = 5.590e-22
Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = 0

Query:    1 KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFREGTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ 86
            KRPG+D FL  M+QF+EIVIFT  +   A   + K+DP  QY   R++RE TRY+DGKYVKDLS LNR L KV+++D NPD   +Q
Sbjct:  174 KRPGVDYFLAYMSQFFEIVIFTSQTSMNAMPILEKLDPY-QYSMYRLYREATRYVDGKYVKDLSHLNRDLSKVIIMDSNPDAFSMQ 258

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BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Match: A0A8H7BGE8_9FUNG (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BGE8_9FUNG)

HSP 1 Score: 97.1 bits (240), Expect = 7.320e-22
Identity = 50/86 (58.14%), Postives = 59/86 (68.60%), Query Frame = 0

Query:    1 KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFREGTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ 86
            KRPG+D FL  M+QFYEIVIFT  S   A   + K+DP  QY   R++RE TRYI GKYVKDL  LNR L KV+++D NPD   LQ
Sbjct:  164 KRPGVDFFLSYMSQFYEIVIFTSQSSMNAIPILDKLDPY-QYALYRLYREATRYIGGKYVKDLRHLNRDLNKVIIMDSNPDAFSLQ 248

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BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Match: A0A8H7W055_9FUNG (Mitochondrial import inner membrane translocase subunit TIM50 n=2 Tax=Mucoraceae TaxID=34489 RepID=A0A8H7W055_9FUNG)

HSP 1 Score: 96.3 bits (238), Expect = 1.500e-21
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0

Query:    1 KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFREGTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ 86
            KRPG+D FL  ++QFYEIVIFT      A   + K+DP  QY   R++RE TRY+DGKYVKDLS LNR L KV+++D NP+   LQ
Sbjct:  176 KRPGVDYFLSYLSQFYEIVIFTSQPSLNALPLLDKLDPY-QYAMYRLYREATRYVDGKYVKDLSHLNRDLSKVIIMDSNPESFSLQ 260

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BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Match: A0A0R3S847_HYMDI (Mitochondrial import inner membrane translocase subunit TIM50 n=2 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A0R3S847_HYMDI)

HSP 1 Score: 95.5 bits (236), Expect = 1.500e-21
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0

Query:    1 KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFREGTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ 86
            KRP L+ FL+++A FYE+V FT  S       + ++DP GQYI  R+FRE TRY  GK++KDLS LNR L +V+L+D NPD   LQ
Sbjct:  175 KRPALELFLQQLAPFYEVVAFTQDSAMTGMPVMAQIDPKGQYIHYRLFRESTRYRKGKHIKDLSCLNRDLSRVILIDWNPDAASLQ 260

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot

BLAST of mRNA_H-elongata_contig19474.5416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBI3_ECTSI	5.340e-39	79.07	Mitochondrial import inner membrane translocase su...	[more]
A0A168L0T1_MUCCL	1.400e-25	58.14	Mitochondrial import inner membrane translocase su...	[more]
A0A3P7L6M4_DIBLA	4.280e-23	52.33	Mitochondrial import inner membrane translocase su...	[more]
A0A0B7NSD9_9FUNG	4.480e-23	58.14	Mitochondrial import inner membrane translocase su...	[more]
A0A2G4SS92_RHIZD	2.940e-22	55.81	Mitochondrial import inner membrane translocase su...	[more]
A0A654GRC9_9CEST	4.800e-22	51.16	Mitochondrial import inner membrane translocase su...	[more]
A0A1X2HI85_SYNRA	5.590e-22	55.81	Mitochondrial import inner membrane translocase su...	[more]
A0A8H7BGE8_9FUNG	7.320e-22	58.14	Mitochondrial import inner membrane translocase su...	[more]
A0A8H7W055_9FUNG	1.500e-21	55.81	Mitochondrial import inner membrane translocase su...	[more]
A0A0R3S847_HYMDI	1.500e-21	52.33	Mitochondrial import inner membrane translocase su...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004274	FCP1 homology domain	SMART	SM00577	forpap2	coord: 1..86 e-value: 5.1E-6 score: 14.5
IPR004274	FCP1 homology domain	PFAM	PF03031	NIF	coord: 1..85 e-value: 9.7E-26 score: 90.4
IPR004274	FCP1 homology domain	PROSITE	PS50969	FCP1	coord: 1..86 score: 26.321
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 1..86 e-value: 3.6E-32 score: 113.1
None	No IPR available	PANTHER	PTHR12210	NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED	coord: 1..86
IPR027111	Mitochondrial import inner membrane translocase subunit Tim50	PANTHER	PTHR12210:SF3	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM50	coord: 1..86
IPR036412	HAD-like superfamily	SUPERFAMILY	56784	HAD-like	coord: 1..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig19474	contig	H-elongata_contig19474:596..1216 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig19474.5416.1	mRNA_H-elongata_contig19474.5416.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig19474 596..1216 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig19474.5416.1 ID=prot_H-elongata_contig19474.5416.1|Name=mRNA_H-elongata_contig19474.5416.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
KRPGLDAFLKEMAQFYEIVIFTDSSGGLADEWITKMDPLGQYISQRVFRE
GTRYIDGKYVKDLSALNRPLEKVVLVDDNPDCIYLQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004274	FCP1_dom
IPR023214	HAD_sf
IPR027111	Tim50
IPR036412	HAD-like_sf