prot_H-elongata_contig194457.5402.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig194457.5402.1
Unique Nameprot_H-elongata_contig194457.5402.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Match: D8LFI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 6.170e-73
Identity = 124/138 (89.86%), Postives = 132/138 (95.65%), Query Frame = 0
Query:    1 VVDAAQAALVQVLITNRQLKEKSGMQKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGEEPEVAAAILGLFHLLPHSPKFLDQLVKLTLKLESVLHR 138
            VVDAAQAALVQV+ TNRQ K+KSGM KDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLS+WFNVTLGDKLFGYLRQW EP KLQ+L DPKGWKPGEEP+VAAAI+GLFHLLPHSPKFLDQLVKLTL+LE+VLHR
Sbjct: 1722 VVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPQKLQTLPDPKGWKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLETVLHR 1859          
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Match: A0A6H5KAF7_9PHAE (FAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF7_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 8.390e-73
Identity = 124/138 (89.86%), Postives = 131/138 (94.93%), Query Frame = 0
Query:    1 VVDAAQAALVQVLITNRQLKEKSGMQKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGEEPEVAAAILGLFHLLPHSPKFLDQLVKLTLKLESVLHR 138
            VVDAAQAALVQV+ TNRQ K+KSGM KDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLS+WFNVTLGDKLFGYLRQW EP KLQ L DPKGWKPGEEP+VAAAI+GLFHLLPHSPKFLDQLVKLTL+LE+VLHR
Sbjct:  802 VVDAAQAALVQVIFTNRQFKDKSGMPKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSNWFNVTLGDKLFGYLRQWTEPEKLQGLPDPKGWKPGEEPDVAAAIMGLFHLLPHSPKFLDQLVKLTLQLEAVLHR 939          
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Match: A0A6N2MXS7_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2MXS7_SALVM)

HSP 1 Score: 135 bits (339), Expect = 1.440e-35
Identity = 73/121 (60.33%), Postives = 90/121 (74.38%), Query Frame = 0
Query:   17 RQLKEKSGMQKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGEEPEVAAAILGLFHLLPHSP-KFLDQLVKLTLKLESVL 136
            RQ+  +  M K+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSSWFNVTLG KL  +L++W EP KL   +  K WK GEEP++AAAI+ LFHLLPH+  KFLD+LV L + LE  L
Sbjct:  211 RQVINQQRMPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSSWFNVTLGGKLLEHLKKWMEPDKLSQSI--KSWKAGEEPKIAAAIIELFHLLPHAASKFLDELVTLNIDLEGAL 329          
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Match: A0A6N2LRE2_SALVM (Uncharacterized protein (Fragment) n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2LRE2_SALVM)

HSP 1 Score: 129 bits (325), Expect = 2.350e-35
Identity = 70/113 (61.95%), Postives = 85/113 (75.22%), Query Frame = 0
Query:   25 MQKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGEEPEVAAAILGLFHLLPHSP-KFLDQLVKLTLKLESVL 136
            M K+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSSWFNVTLG KL  +L++W EP KL   +  K WK  EEP++AAAI+ LFHLLPH+  KFLD+LV L + LE  L
Sbjct:   40 MPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSSWFNVTLGGKLLEHLKKWMEPDKLSQSI--KSWKASEEPKIAAAIIELFHLLPHAASKFLDELVTLNIDLEGAL 150          
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Match: A0A6M2E7K4_9ROSI (Uncharacterized protein n=1 Tax=Populus davidiana TaxID=266767 RepID=A0A6M2E7K4_9ROSI)

HSP 1 Score: 138 bits (348), Expect = 3.110e-35
Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 0
Query:   17 RQLKEKSGMQKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGEEPEVAAAILGLFHLLPHSP-KFLDQLVKLTLKLESVL 136
            RQ+  +  M KDLLQS LRP+L NL H + LS+PLLQGL+RLL LLSSWFNVTLG KL  +L++W EP KL   +  K WK GEEP++AAAI+ LFHLLPH+  KFLD+LV LT+ LE  L
Sbjct:  982 RQVINQQRMPKDLLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSSWFNVTLGGKLLEHLKKWMEPDKLSQSI--KSWKAGEEPKIAAAIIELFHLLPHAASKFLDELVTLTIDLEGAL 1100          
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Match: A0A836XPR9_9ROSI (FAT domain-containing family protein n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836XPR9_9ROSI)

HSP 1 Score: 138 bits (347), Expect = 4.210e-35
Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 0
Query:   17 RQLKEKSGMQKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGEEPEVAAAILGLFHLLPH-SPKFLDQLVKLTLKLESVL 136
            RQ+  +  M K+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSSWFNVTLG KL  +L++W EP KL   +  K WK GEEP++AAAI+ LFHLLPH S KFLD+LV LT+ LE  L
Sbjct: 1955 RQVINQQRMPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSSWFNVTLGGKLLEHLKKWMEPDKLSQSI--KSWKAGEEPKIAAAIIELFHLLPHASSKFLDELVTLTIDLEGAL 2073          
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Match: A0A1J3I0L9_NOCCA (Putative transcription-associated protein 1 (Fragment) n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I0L9_NOCCA)

HSP 1 Score: 130 bits (326), Expect = 6.050e-35
Identity = 71/121 (58.68%), Postives = 90/121 (74.38%), Query Frame = 0
Query:   17 RQLKEKSGMQKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGEEPEVAAAILGLFHLLP-HSPKFLDQLVKLTLKLESVL 136
            RQ+  +  M K+LLQS LRP+L NL H + L++PLLQGL+RLL LLS+WFNVTLG KL  +L++W EP KL      K WK GEEP++AAAI+ LFHLLP  + KFLD+LV LT+ LE+ L
Sbjct:    2 RQVINQQRMPKELLQSSLRPILVNLAHTKNLNMPLLQGLARLLELLSNWFNVTLGVKLLEHLKKWLEPEKLAQ--SQKSWKAGEEPKIAAAIIELFHLLPLAASKFLDELVTLTIDLEAAL 120          
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Match: A0A078JX81_BRANA (BnaCnng66780D protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A078JX81_BRANA)

HSP 1 Score: 135 bits (341), Expect = 1.000e-34
Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 0
Query:   17 RQLKEKSGMQKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGEEPEVAAAILGLFHLLPHSP-KFLDQLVKLTLKLESVL 136
            RQ+  +  M K+LLQS LRP+L NL H + LS+PLLQGL+RLL LLS+WFNVTLG KL  +L++W EP KL      K WK GEEP++AAAI+ LFHLLPH+  KFLD+LV LT+ LE+ L
Sbjct:   65 RQVINQQRMPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSNWFNVTLGGKLLEHLKKWLEPEKLAQ--SQKSWKAGEEPKIAAAIIELFHLLPHAASKFLDELVTLTIDLEAAL 183          
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Match: A0A6N2KY14_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KY14_SALVM)

HSP 1 Score: 137 bits (344), Expect = 1.050e-34
Identity = 75/119 (63.03%), Postives = 90/119 (75.63%), Query Frame = 0
Query:   17 RQLKEKSGMQKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGEEPEVAAAILGLFHLLPHSP-KFLDQLVKLTLKLES 134
            RQ+  +  M K+LLQS LRP+L NL H + LSLPLLQGL+RLL LLSSWFNVTLG KL  +L++W EP KL   L  K WK GEEP++AAAI+ LFHLLPH+  KFLD+LV LT+ LE 
Sbjct: 1395 RQVISQQKMPKELLQSSLRPILVNLAHTKNLSLPLLQGLARLLELLSSWFNVTLGGKLLEHLKKWLEPEKLAQSL--KSWKAGEEPKIAAAIIELFHLLPHAASKFLDELVTLTIDLEG 1511          
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Match: A0A836XR71_9ROSI (FAT domain-containing family protein n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836XR71_9ROSI)

HSP 1 Score: 137 bits (344), Expect = 1.060e-34
Identity = 74/121 (61.16%), Postives = 91/121 (75.21%), Query Frame = 0
Query:   17 RQLKEKSGMQKDLLQSCLRPVLKNLTHIQKLSLPLLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGEEPEVAAAILGLFHLLPHSP-KFLDQLVKLTLKLESVL 136
            RQ+  +  M K+LLQS LRP+L NL H + LS+PLLQGL+RLL LLSSWFNVTLG KL  +L++W EP KL   +  K WK GEEP++AAAI+ LFHLLPH+  KFLD+LV LT+ LE  L
Sbjct: 1393 RQVINQQRMPKELLQSSLRPILVNLAHTKNLSMPLLQGLARLLELLSSWFNVTLGGKLLEHLKKWMEPDKLSQSI--KSWKAGEEPKIAAAIIELFHLLPHAASKFLDELVTLTIDLEGAL 1511          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig194457.5402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFI6_ECTSI6.170e-7389.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAF7_9PHAE8.390e-7389.86FAT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6N2MXS7_SALVM1.440e-3560.33Uncharacterized protein n=1 Tax=Salix viminalis Ta... [more]
A0A6N2LRE2_SALVM2.350e-3561.95Uncharacterized protein (Fragment) n=1 Tax=Salix v... [more]
A0A6M2E7K4_9ROSI3.110e-3561.98Uncharacterized protein n=1 Tax=Populus davidiana ... [more]
A0A836XPR9_9ROSI4.210e-3561.98FAT domain-containing family protein n=1 Tax=Salix... [more]
A0A1J3I0L9_NOCCA6.050e-3558.68Putative transcription-associated protein 1 (Fragm... [more]
A0A078JX81_BRANA1.000e-3460.33BnaCnng66780D protein n=1 Tax=Brassica napus TaxID... [more]
A0A6N2KY14_SALVM1.050e-3463.03Uncharacterized protein n=1 Tax=Salix viminalis Ta... [more]
A0A836XR71_9ROSI1.060e-3461.16FAT domain-containing family protein n=1 Tax=Salix... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033317Transcription-associated protein 1PANTHERPTHR11139:SF1TRANSFORMATION/TRANSCRIPTION DOMAIN-ASSOCIATED PROTEINcoord: 1..123
NoneNo IPR availablePANTHERPTHR11139ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDcoord: 1..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig194457contigH-elongata_contig194457:190..1054 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig194457.5402.1mRNA_H-elongata_contig194457.5402.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig194457 190..1054 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig194457.5402.1 ID=prot_H-elongata_contig194457.5402.1|Name=mRNA_H-elongata_contig194457.5402.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
VVDAAQAALVQVLITNRQLKEKSGMQKDLLQSCLRPVLKNLTHIQKLSLP
LLQGLSRLLYLLSSWFNVTLGDKLFGYLRQWAEPAKLQSLLDPKGWKPGE
EPEVAAAILGLFHLLPHSPKFLDQLVKLTLKLESVLHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033317TRA1/TRRAP