prot_H-elongata_contig19436.5399.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig19436.5399.1 vs. uniprot
Match: D8LMK0_ECTSI (DUF547 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK0_ECTSI) HSP 1 Score: 217 bits (553), Expect = 2.280e-60 Identity = 152/350 (43.43%), Postives = 183/350 (52.29%), Query Frame = 0
Query: 1 MESSADRAFRSSSQTLSPTTTAAYPAGNDGDAGVQGGREERTSPPPVSIGQALSSARRKAGPLMARKATTFLDSPSRDLSDRSGWGESSKGSTASGGAIRRPS----------------------------LGWGSKSSLAVKEGMVLRVLSEHHLSQQMAVLLPTSLTFSRPRSQRGLRLLPQDILRVEVGGCEGEEDGDPLL------QYIPGMFPVEIHTLGRVHYMLVEGLSEARSWAAVIEHHFGDERR------ASPLDEVIITDPPEQYMIKRLSWKTKNVWVLNARR------------------AGLSATPPEGDWGDGCWLDRGGPGGEICEFLPGLLRQ 292
MESSADRA+RS + + T TA PA + D G SPP IG ++A +G K+ SP S W KG AS P W ++SSLA+KEGMVLRVLSEHHLSQQ+AVLLP+SLTFSRPR Q LRLL +DI+ VE+GG G DG Q IPGM VEIHT+GRVHYMLVEGL EAR WA I+ G ++ ASP D++ I+DP QYM K+ SWK N WVLN RR G SA + WG GCW+D+GG GG++C+F+ GLLRQ
Sbjct: 1145 MESSADRAYRSYNPVAAATATA--PAASSADGGA-------ASPPGFPIGVGDANAMGTSG-----KSEERARSPDASAS----WAVGGKGQPASPPLYSPPQSSVKXXXXXXXXXXXXXXXXXXXXXXXXXSWTTRSSLAIKEGMVLRVLSEHHLSQQVAVLLPSSLTFSRPRKQC-LRLLTRDIMAVELGG--GPVDGSGSTPPPHSSQLIPGMHLVEIHTIGRVHYMLVEGLQEARDWAVDIQSQLGQQQADGGRASASPQDDLSISDPFSQYMTKKSSWKATNFWVLNCRRLLELNGAAFGGXXXXXXXVGRSA---DVGWGGGCWMDQGGVGGQVCDFVSGLLRQ 1470
BLAST of mRNA_H-elongata_contig19436.5399.1 vs. uniprot
Match: A0A6H5KCR6_9PHAE (DUF547 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR6_9PHAE) HSP 1 Score: 204 bits (520), Expect = 5.910e-56 Identity = 117/215 (54.42%), Postives = 138/215 (64.19%), Query Frame = 0
Query: 104 LGWGSKSSLAVKEGMVLRVLSEHHLSQQMAVLLPTSLTFSRPRSQRGLRLLPQDILRVEVGGCEGEEDGDPLL------QYIPGMFPVEIHTLGRVHYMLVEGLSEARSWAAVIEHHF------GDERRASPLDEVIITDPPEQYMIKRLSWKTKNVWVLNARRA--------------GLSATPPEGDWGDGCWLDRGGPGGEICEFLPGLLRQ 292
LG +SSLA+KEGMVLRVLSEHHLSQQ+AVLLP+SLTFSRPR Q LRLL +DI+ VE+GG G DG Q IPGM+ VEIHT+GRVHYMLVEGL EAR WA I+ G ASP D++ I+DP QYM K+ SWK N WVLN RR G+ G WG GCW+D+GG GG++C+F+ GLL Q
Sbjct: 1167 LGPPGESSLAIKEGMVLRVLSEHHLSQQVAVLLPSSLTFSRPRKQC-LRLLTRDIMAVELGG--GPVDGSGSTPPPHSSQLIPGMYLVEIHTIGRVHYMLVEGLQEARDWAVDIQSQLHQQQADGGRTSASPQDDLSISDPFSQYMTKKSSWKATNFWVLNCRRLLELNGAASGGGGCRGVGRAADVG-WGGGCWMDQGGVGGQVCDFVSGLLSQ 1377
BLAST of mRNA_H-elongata_contig19436.5399.1 vs. uniprot
Match: A0A836CH08_9STRA (DUF547 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH08_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.420e-9 Identity = 55/198 (27.78%), Postives = 87/198 (43.94%), Query Frame = 0
Query: 100 RRPSLGWGSKSSLAVK------EGMVLRVLSEHHLSQQMAVLLPTSLTFSRPRSQRGLRLLPQDILRVEVGGCEGEEDGDPLLQYIPGMFPVEIHTLGRVHYMLVEGLSEARSWAAVIEH----------------HFGDERRASPLD-------------EVIITDPPEQYMIKRLSWKTKNVWVLNARRAGLSATP 262
RRPS+ G++++ + EGMV+R LSE+H S++ AV+ S+ SR ++ LR+ D++ V V + ++PG V++HTLGRVH +L+ GL W A + G E LD V P ++ + +W+ ++LN RR LSA P
Sbjct: 936 RRPSMLSGARAAALLTAPPPQVEGMVIRALSEYHWSEEWAVVTDKSVLLSR-HGRQTLRIDKWDLMDVTVANAASDARSGV---FLPGFVTVKVHTLGRVHALLLRGLERVAPWVAALNALRTSASLESARFLRATSAGSEMSDLTLDGIGGGGGAEDEDTSVQAASPYGSFLQHKSTWRGSGRYILNCRR--LSAAP 1127 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19436.5399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig19436.5399.1 ID=prot_H-elongata_contig19436.5399.1|Name=mRNA_H-elongata_contig19436.5399.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=292bpback to top |