prot_H-elongata_contig19403.5390.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19403.5390.1
Unique Nameprot_H-elongata_contig19403.5390.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length759
Homology
BLAST of mRNA_H-elongata_contig19403.5390.1 vs. uniprot
Match: D8LAX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX8_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 1.180e-130
Identity = 283/532 (53.20%), Postives = 321/532 (60.34%), Query Frame = 0
Query:  263 AEEQGQRP-LLITIGPQCSGKTTLLRHLGQSGAAVTDVAIDDHPSVYFDIPLNLLLDGCESGSHEDETVGGLPLSSRLRDPGCVEIRLVASRLLGITPAEEFANGIQRCGGSKASPSALDALCGAVETAVSDNLVVSTPSVDVFIRESLFPEAISASLRRLAAAADKEWKIVAWGNTNTQARDFRGALEQAKSTGRPVRFLRWGHELPRVSLDELSRRNVYRFATTGRYVETAAIETALARVERLYASTNGGDSAELAFAAGFRMDASGRVSSLSSYSSSAAGDRGGAPPPRPGVSS--SEAG-STGHVERRKRRT---RRPSDTSPGRRGNPLEPGDVDLGGQAG---GRDGGL-KRGMPPAG----SEEMTPRQSSDSTG---------PYPASRGGGGLRSSVNFLGTPYYGRCGVVLGLAQAWCPRGGRRLAVGGSGRRR------------AVESPTVLFASEWKRMREWRRSGYSDDDIDPTMSSCYFSKPANSTGVLKRFDAGS-RNADLEEMELVRTISSIRQR 757
            AE    RP LL+TIGPQC+GKT+LLR L                 VY  IP  LLL GC  GS ED  +   PLS RL DPGCVE RLV  RL G   AEEFA  +  C G +ASP+A+ ALC AVE+AVSDN+ +STP+VDVF+RE+LFP+AIS+S  RLAAAA  E  +VAWGNTNTQARD+RGALEQA+ TGRPVRFLRWGHELP +SL+ELSRRNV RFA TGRYVETAAIE ALARV++LYAST GGD A LA AAGF+MDASG V S SS             PPR    S  S AG   G  ER  RR       +DTS    G         +GG  G   GRDG    RG         +   T R+ + S G         P PA+   G  R ++       Y   G  LGLAQ W PRGG     GGS RRR            A   PTV+F +EW R REWRR+GY+DDDIDP M SC+F  PANSTGVL+R D G    ADLEEMELVR I S RQR
Sbjct:    7 AEAATNRPALLVTIGPQCAGKTSLLRALAAKS------------EVYHKIPTALLLGGCARGSPEDLLLAQRPLSDRLGDPGCVETRLVTFRLEGHISAEEFAGRLGECRG-QASPAAIAALCRAVESAVSDNVRISTPTVDVFVRENLFPDAISSSQERLAAAATDEDGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPFLSLEELSRRNVCRFAYTGRYVETAAIENALARVDKLYASTAGGDPARLALAAGFQMDASGGVHSQSS-------------PPRRRHDSPRSRAGRGNGSWERNTRRRVGGGGTADTSAYSGGG--------IGGSEGVVRGRDGAWDNRGGSGTWFHDEASRRTTRREATSHGVPXXXXMAQPTPAA---GPDRFTIEGADRRRYEDTGAPLGLAQEWTPRGGT--GAGGSSRRRDHSDTGWGVGGPAGVPPTVMFGNEWGRKREWRRTGYTDDDIDPGMGSCFFRTPANSTGVLRRSDLGEGMGADLEEMELVRRIKSFRQR 499          
BLAST of mRNA_H-elongata_contig19403.5390.1 vs. uniprot
Match: A0A6H5JPA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA7_9PHAE)

HSP 1 Score: 412 bits (1059), Expect = 4.930e-129
Identity = 287/554 (51.81%), Postives = 321/554 (57.94%), Query Frame = 0
Query:  264 EEQGQRP-LLITIGPQCSGKTTLLRHLGQSGAA--------------------------------VTDVAIDDHPSVYFDIPLNLLLDGCESGSHEDETVGGLPLSSRLRDPGCVEIRLVASRLLGITPAEEFANGIQRCGGSKASPSALDALCGAVETAVSDNLVVSTPSVDVFIRESLFPEAISASLRRLAAAADKEWKIVAWGNTNTQARDFRGALEQAKSTGRPVRFLRWGHELPRVSLDELSRRNVYRFATTGRYVETAAIETALARVERLYASTNGGDSAELAFAAGFRMDASGRVSSLSSYSSSAAGDRGGAPPPRPGVSSSEAGSTGHVERRKRRTRRPSDTSPGRRGNPLEPGDVDLGGQAGGRDGGL-KRGMPPAGSEEMTPRQSSDST-----------GPYPASRGGGGLRSSVNFLGTPY--YGRCGVVLGLAQAWCPRGGRRLAVGGSGRRRAVES------------PTVLFASEWKRMREWRRSGYSDDDIDPTMSSCYFSKPANSTGVLKRFDAGS-RNADLEEMELVRTISSIRQR 757
            E    RP LL+TIGPQC+GKT+LLR L     A                                V DV IDDHPSVY  IP  LLL GC  G  ED  +    LS RL DPGCVE RLVA RL G   AEEFA  +  C G +ASP+A+ ALC AVE+AVSDN  +STP+VDVF+RE+LFP+AIS+S  RLAAAA  E  +VAWGNTNTQARD+RGALEQA+ TGRPVRFLRWGHELP +SL+ELSRRNV RFA TGRYVETAAIE ALARV++LYAST GGD A LA AAGF+MDASGRV S  S            PP R G  S E  +   V    R     +DTS    G     G     G   GRDG    RG    GSE     Q+S  T            P P +R           LG     Y   G  LGLAQ W PRGG     GGS RRR                PTV+F +EW R REWRR+GY+DDDIDP M SC+F  PANSTGVL+R D G    ADLEEMELVR I S+RQR
Sbjct:  278 EAAASRPALLVTIGPQCAGKTSLLRALAAKSEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRSVADVTIDDHPSVYHKIPTALLLGGCARGCPEDLLLARRSLSDRLGDPGCVETRLVAFRLEGHISAEEFAGRLGECRG-QASPAAIAALCWAVESAVSDNGRISTPTVDVFVRENLFPDAISSSQERLAAAARDEEGLVAWGNTNTQARDYRGALEQAERTGRPVRFLRWGHELPILSLEELSRRNVCRFACTGRYVETAAIENALARVDKLYASTAGGDPARLALAAGFQMDASGRVHSQPS------------PPRRRGNGSWEKNTRRRVGGGGR-----ADTSAHSGG-----GIGSSEGVVRGRDGAWDNRG----GSETWFHDQASGRTMRREATSHSVPPPPPMARPIPAAGPDRFTLGADRRRYEYTGAPLGLAQEWTPRGGT--GAGGSSRRRDHSDTGGGAGGPEGVPPTVMFGNEWGRKREWRRTGYTDDDIDPEMGSCFFRTPANSTGVLRRSDLGEGTGADLEEMELVRRIKSLRQR 802          
BLAST of mRNA_H-elongata_contig19403.5390.1 vs. uniprot
Match: A0A835Z5Q0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q0_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.930e-54
Identity = 128/273 (46.89%), Postives = 163/273 (59.71%), Query Frame = 0
Query:  270 PLLITIGPQCSGKTTLLRHLGQS--GAAVTDVAIDDHPSVYFDIPLNLLLDGCESGSHEDETVGGLPLSSRLRDPGCVEIRLVASRLLGITPAEEFANGIQRCGGSKASP----SALDALCGAVETAVSDNLVVSTPSVDVFIRESLFPEAISASLRRLAAAADKEWKIVAWGNTNTQARDFRGALEQAKSTGRPVRFLRWGHELPRVSLDELSRRNVYRFATTGRYVETAAIETALARVERLYASTNGGDSAELAFAAGFRMDASGRVSSLS 536
            PLLITIGPQC+GKTT L  LGQS  GA + DVAIDDHP VY+ +P    LD       +D  +    +S R+ D   V   LVA RL G+  A+EF    Q     +  P       +    AVE AV+  L + TP+VD+F+    +P  +  S RRL     +    VAWGNTNT+++D+R ALE A++  RPVR+LRWGHELP V L +L  R++ RFA TGRYV   A+  AL RVE LYA T+GGD A L  AAGF+M A  RV ++S
Sbjct:   93 PLLITIGPQCAGKTTTLLALGQSLGGARICDVAIDDHPDVYYKLPTACALDPDSITPQQDVLLFDKTVSERMADYTVVGKCLVAKRLEGLLTADEFRE--QWLSSVEFYPYPDGEVEELWIAAVEAAVAAGLRMETPTVDLFVPNGHYPRGVRDSNRRLRQECSRHPGPVAWGNTNTKSKDYREALECAQAVNRPVRYLRWGHELPAVPLRDLFARDLRRFAATGRYVPPQAVAAALRRVEHLYARTDGGDPALLTAAAGFQMGAGARVRAVS 363          
BLAST of mRNA_H-elongata_contig19403.5390.1 vs. uniprot
Match: A0A835YGB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGB3_9STRA)

HSP 1 Score: 182 bits (463), Expect = 2.260e-46
Identity = 115/267 (43.07%), Postives = 155/267 (58.05%), Query Frame = 0
Query:  268 QRPLLITIGPQCSGKTTLLRHLGQSGAAVTDVAIDDHPSVYFDIPLNLLLDGCESGSHEDETVGGLPLSSRLRDPGCVEIRLVASRLLGITPAEEFANGIQRCGGSK--ASPSALDALCGAVETAVSDNLVVSTPSVDVFIRESLFPEAISASLRRLAAAADKEWKIVAWGNTNTQARDFRGALEQAKSTGRPVRFLRWGHELPRVSLDELSRRNVYRFATTGRYVETAAIETALARVERLYASTNGGDSAELAFAAGFRMDASGRV 532
            + PLLITIGPQC+GKTT LR +G     V DVAID+HP VY+++P   +LD   S + ED T+ G  LS RL+  G     LVA RL G+  + +F    +   G    A          +VE AV++ + +  P+VD+F+ E   P+ +      L     +    VAWGNTNT+ARD+  AL  A+   RPV F+R+GHE+P +S+ EL  RN+ RFA TGR++    +  A  RV+ LYA T GG+ A LA AAGF MD  GRV
Sbjct:   68 EHPLLITIGPQCAGKTTTLRKMG-----VFDVAIDEHPDVYYELPTAYILDPT-STTLEDVTIFGRRLSDRLQYTGVYANMLVAQRLEGLLSSAKFEAEWKAIAGPYLLADRDVDRIFLESVEAAVAEGVRLYAPTVDLFLPEGHAPKGMREHSVVLRYECHRRRGAVAWGNTNTRARDYAAALATAQECTRPVHFVRYGHEIPAISIRELFGRNLRRFAATGRFIPPQTMWAARQRVKHLYARTGGGEPARLAAAAGFIMDDEGRV 328          
BLAST of mRNA_H-elongata_contig19403.5390.1 vs. uniprot
Match: W7TBP9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBP9_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.300e-21
Identity = 94/268 (35.07%), Postives = 124/268 (46.27%), Query Frame = 0
Query:  271 LLITIGPQCSGKTTLLRHLGQSGAA----VTDVAIDDHPSVYFDIPLNLLLDGCESGSHE-------DETVGGLPLSSRLRDPGCVEIRLVASRLLGITPAEEFANGIQRCGGSKAS---------------PSALD--------ALCGAVETAVSDNLV--VSTPSVDVFIRESLF-----PEAISASLRRLAAAADKEWKIVAWGNTNTQARDFRGALEQAKSTGRPVRFLRWGHELPR-VSLDELSRRNVYRFATTGRYVETAAI 496
            LLIT+GPQC+GKTTLL+HL +S  +    + DVAIDD   +Y  +P+ L L+G              D+ + G  LSSR  D   VE RLV   L G+   E     ++                       PS  D        AL  A  T  +   V  V+T S        LF     P+AI  S +RL  +      + AWGNTN++ARDF+ A+  A   GR V F+RWG EL + V  +EL  RNV+R    G+YV    I
Sbjct:   89 LLITVGPQCAGKTTLLKHLNESRPSFAPPLVDVAIDDQAGLYVPLPMPLFLEGGRXXXXXXXXXXSLDKLIKGRTLSSRCDDSATVESRLVLGYLHGMWEIENVEQALRALTSXXXXXXXXXXXXXXXXXXCPSEEDEWITLLLHALAKARATIATTTKVDTVATWSPPAASHYQLFLPDLLPQAIRRSYQRLTRSLCGPGPV-AWGNTNSKARDFKEAILLAGKAGRRVLFIRWGKELGKEVGKEELVLRNVWRAYREGKYVPVRTI 355          
BLAST of mRNA_H-elongata_contig19403.5390.1 vs. uniprot
Match: A0A7S3QJ42_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ42_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.420e-15
Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = 0
Query:  396 VVSTPSVDVFIRESLFPEAISASLRRLAAAADKEW--KIVAWGNTNTQARDFRGALEQAKSTGRPVRFLRWGHELPRVSLDELSRRNVYRFATTGRYVETAAIETALARVERL 506
            ++ TP +D+F+ +++F   I  + R     A+     + ++WGNTNT+  ++  AL+ A+  GRPVRF+ WG  LP+VS  EL RRN  RF   GRY+   AI  +L R+E+L
Sbjct:  305 LIKTPYIDMFVPQAIFRGGIDRAKRSFYELAEHAPIDQPISWGNTNTRPIEYVKALKAAEKFGRPVRFVAWGQRLPKVSRQELLRRNTARFRNNGRYIPAGAIAASLGRIEKL 417          
BLAST of mRNA_H-elongata_contig19403.5390.1 vs. uniprot
Match: B8C738_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C738_THAPS)

HSP 1 Score: 88.2 bits (217), Expect = 2.010e-14
Identity = 76/264 (28.79%), Postives = 117/264 (44.32%), Query Frame = 0
Query:  266 QGQRPLLITIGPQCSGKTTLLRHL--------GQSGAAVT---DVAIDDHPSVYFDIPLNLLLDGC----ESGSHEDETVGGLPLSSRLRDPGCVEIRLVASRLLGITPAEEFA---NGIQRCGGSKASP-------SALDALCGAVETAVSDNL-----------------VVSTPSVDVFIRESLFPEAISASLRRL------AAAADKEWKIV----------------AWGNTNTQARDFRGALEQAKSTGRPVRFLRWG 465
            Q + P+ IT+GPQC GKTT+L+ L         + G A T   D+ IDD   VYF +P+ L L       E  S  ++++ G  +  R+ DP   E++LV  RL G   A +F    N  Q+ G  + S        + +  L  AVE  +  N                  +     +D+F+ ES+F       +R        ++A D+  +++                AWGNTNT+ R+F  A+E A  +GRPV F+ +G
Sbjct:   98 QSKGPIYITVGPQCCGKTTILKRLFGTVFHNNEEEGGASTGGLDITIDDQELVYFPVPIQLFLPDAALPSEQRSTSNQSILGKSVRDRVVDPSNNELKLVIQRLAGKLTAGDFIERLNNPQKNGQQQQSAPLQKNQKAVVADLVSAVEEVIKINTDPKGETTENSMFFAATKLTLPKQIDLFVVESIFRPRPLELMRNTKNNTPSSSALDEAQRLIKSISTDSSVHDSAAPLAWGNTNTRPREFLSAMEAATLSGRPVEFIVFG 361          
BLAST of mRNA_H-elongata_contig19403.5390.1 vs. uniprot
Match: A0A4D9D5F8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5F8_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.260e-11
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0
Query:  410 LFPEAISASLRRLAAAADKEWKIVAWGNTNTQARDFRGALEQAKSTGRPVRFLRWGHELPR-VSLDELSRRNVYRFATTGRYVETAAIETALARVERL 506
            L P+AI  S +RL+ +      + AWGNTN++ARDF+ A+  A   GR VRFLRWG EL + V  +EL  RNV+R    G+YV   AI  AL R + L
Sbjct:  103 LLPQAIRRSYQRLSRSLCGPGPV-AWGNTNSKARDFKEAILLAGKAGRRVRFLRWGKELGKEVGKEELILRNVWRAYREGKYVPVRAISAALERTKVL 199          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19403.5390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LAX8_ECTSI1.180e-13053.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPA7_9PHAE4.930e-12951.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z5Q0_9STRA3.930e-5446.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YGB3_9STRA2.260e-4643.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TBP9_9STRA1.300e-2135.07Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A7S3QJ42_9STRA2.420e-1539.82Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B8C738_THAPS2.010e-1428.79Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A4D9D5F8_9STRA3.260e-1146.94Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..758
NoneNo IPR availableTMHMMTMhelixcoord: 17..39
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 275..507

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19403contigH-elongata_contig19403:962..5660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19403.5390.1mRNA_H-elongata_contig19403.5390.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19403 962..5874 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19403.5390.1 ID=prot_H-elongata_contig19403.5390.1|Name=mRNA_H-elongata_contig19403.5390.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=759bp
MWLRLSLRCITQRQELILLLLLQMLFCWLSAVTAIAMGLVLKDAGSDRRG
NIVMRDRNMFPVRQPEFSSRLASRELLTTTEHRPLAECGSRRRPSRWRRA
ARSPASSADSSGHERDRSYNGIPAEHISSAGGCVGTDRPRAAGQRGRGAH
CTRAFVVPSVWPLFRETQEGGRYPFSAHTCGTSRWRGTSGSSEISSKKAS
RLPLFSLEFIDPAASRAVSGGTGKYRRPHQGEGFDQDARGRCVDCFVLGA
NAVSGFGAGDLVAEEQGQRPLLITIGPQCSGKTTLLRHLGQSGAAVTDVA
IDDHPSVYFDIPLNLLLDGCESGSHEDETVGGLPLSSRLRDPGCVEIRLV
ASRLLGITPAEEFANGIQRCGGSKASPSALDALCGAVETAVSDNLVVSTP
SVDVFIRESLFPEAISASLRRLAAAADKEWKIVAWGNTNTQARDFRGALE
QAKSTGRPVRFLRWGHELPRVSLDELSRRNVYRFATTGRYVETAAIETAL
ARVERLYASTNGGDSAELAFAAGFRMDASGRVSSLSSYSSSAAGDRGGAP
PPRPGVSSSEAGSTGHVERRKRRTRRPSDTSPGRRGNPLEPGDVDLGGQA
GGRDGGLKRGMPPAGSEEMTPRQSSDSTGPYPASRGGGGLRSSVNFLGTP
YYGRCGVVLGLAQAWCPRGGRRLAVGGSGRRRAVESPTVLFASEWKRMRE
WRRSGYSDDDIDPTMSSCYFSKPANSTGVLKRFDAGSRNADLEEMELVRT
ISSIRQRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase