prot_H-elongata_contig190802.5270.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig190802.5270.1
Unique Nameprot_H-elongata_contig190802.5270.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
BLAST of mRNA_H-elongata_contig190802.5270.1 vs. uniprot
Match: D7G276_ECTSI (Mitochondrial import inner membrane translocase subunit TIM23 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G276_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 1.910e-17
Identity = 36/51 (70.59%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 ATFYTCFESLLDHYEVDQLAPVQQMGMEDVINPLLAGASTGLLYKSAGEKR 51
            AT+YTC E+LLDH+EVDQ+ PVQQ G+ ++INPLLAGASTGLLYKS+   R
Sbjct:  123 ATYYTCAETLLDHFEVDQMGPVQQAGLGEIINPLLAGASTGLLYKSSAGPR 173          
BLAST of mRNA_H-elongata_contig190802.5270.1 vs. uniprot
Match: A0A7S1XNQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNQ0_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 1.730e-5
Identity = 26/51 (50.98%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    1 ATFYTCFESLLDHYEVDQLAPVQQMGMEDVINPLLAGASTGLLYKSAGEKR 51
            A FY+ F +L D Y VD      Q+G+ D +NP+L+GASTGLLYKS    R
Sbjct:  113 ALFYSGFLALYDGYNVDM-----QLGVGDWVNPVLSGASTGLLYKSTAGPR 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig190802.5270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G276_ECTSI1.910e-1770.59Mitochondrial import inner membrane translocase su... [more]
A0A7S1XNQ0_9STRA1.730e-550.98Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig190802contigH-elongata_contig190802:238..390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig190802.5270.1mRNA_H-elongata_contig190802.5270.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig190802 238..390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig190802.5270.1 ID=prot_H-elongata_contig190802.5270.1|Name=mRNA_H-elongata_contig190802.5270.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
ATFYTCFESLLDHYEVDQLAPVQQMGMEDVINPLLAGASTGLLYKSAGEK
R
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