prot_H-elongata_contig190033.5236.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig190033.5236.1
Unique Nameprot_H-elongata_contig190033.5236.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
BLAST of mRNA_H-elongata_contig190033.5236.1 vs. uniprot
Match: D7FT24_ECTSI (Similar to ataxia telangiectasia and Rad3 related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT24_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 6.420e-10
Identity = 30/37 (81.08%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 FASAVSEARAGVMAGLGAASMESYQRAYPFLIKLHSL 37
            FA+A+++ARA VMAGLGAASMESY+RAYPFL+KLHSL
Sbjct: 1226 FAAAITQARADVMAGLGAASMESYRRAYPFLLKLHSL 1262          
BLAST of mRNA_H-elongata_contig190033.5236.1 vs. uniprot
Match: A0A6H5KWD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD2_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 6.450e-10
Identity = 30/37 (81.08%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 FASAVSEARAGVMAGLGAASMESYQRAYPFLIKLHSL 37
            FA+A+++ARA VMAGLGAASMESY+RAYPFL+KLHSL
Sbjct:   69 FAAAITQARADVMAGLGAASMESYRRAYPFLLKLHSL 105          
BLAST of mRNA_H-elongata_contig190033.5236.1 vs. uniprot
Match: A0A5J4XEM8_9CHLO (Serine threonine-kinase ATR-like (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XEM8_9CHLO)

HSP 1 Score: 47.4 bits (111), Expect = 5.050e-5
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    5 VSEARAGVMAGLGAASMESYQRAYPFLIKLHSL 37
            ++EAR+ VMA L AASMESY RAYP+L+KLH L
Sbjct: 1590 IAEARSEVMAPLSAASMESYTRAYPYLVKLHML 1622          
BLAST of mRNA_H-elongata_contig190033.5236.1 vs. uniprot
Match: A0A7S2AXE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXE0_9STRA)

HSP 1 Score: 45.1 bits (105), Expect = 8.690e-5
Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    1 FASAVSEARAGVMAGLGAASMESYQRAYPFLIKLHSL 37
            F  A+  ARA VM GL AAS ESYQRAYP L++LH L
Sbjct:   69 FQGAMRNARAHVMQGLAAASRESYQRAYPLLMRLHIL 105          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig190033.5236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FT24_ECTSI6.420e-1081.08Similar to ataxia telangiectasia and Rad3 related ... [more]
A0A6H5KWD2_9PHAE6.450e-1081.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5J4XEM8_9CHLO5.050e-569.70Serine threonine-kinase ATR-like (Fragment) n=1 Ta... [more]
A0A7S2AXE0_9STRA8.690e-564.86Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig190033contigH-elongata_contig190033:420..530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig190033.5236.1mRNA_H-elongata_contig190033.5236.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig190033 420..530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig190033.5236.1 ID=prot_H-elongata_contig190033.5236.1|Name=mRNA_H-elongata_contig190033.5236.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
FASAVSEARAGVMAGLGAASMESYQRAYPFLIKLHSL
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