prot_H-elongata_contig188911.5186.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig188911.5186.1
Unique Nameprot_H-elongata_contig188911.5186.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
BLAST of mRNA_H-elongata_contig188911.5186.1 vs. uniprot
Match: A0A6H5K0D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D3_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 8.830e-20
Identity = 44/71 (61.97%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    1 MDERELTRWVADELHGVLGFSDLSTAQFIVALARRTVRSGKGGAELLEGLASVEVPSNAASRAFVGKLIAR 71
            M +REL +WV+D+LH V+GFS+ STAQF+VALARR  +SGKG A LL GL+ ++VP+NA SRAF  +L+AR
Sbjct:   71 MGDRELLQWVSDKLHDVVGFSESSTAQFVVALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMAR 141          
BLAST of mRNA_H-elongata_contig188911.5186.1 vs. uniprot
Match: D8LHZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ7_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 9.830e-19
Identity = 42/71 (59.15%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    1 MDERELTRWVADELHGVLGFSDLSTAQFIVALARRTVRSGKGGAELLEGLASVEVPSNAASRAFVGKLIAR 71
            M +REL +WV+D+LH V+GFS+ STAQF++ALARR  +SGKG A LL GL+ ++VP+NA SRAF  +L+ R
Sbjct:    1 MGDRELLQWVSDKLHDVVGFSESSTAQFVLALARRASKSGKGAAALLAGLSDLDVPANATSRAFAAELMTR 71          
BLAST of mRNA_H-elongata_contig188911.5186.1 vs. uniprot
Match: A0A0D2KYR4_9CHLO (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KYR4_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 2.310e-7
Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    3 ERELTRWVADELHGVLGFSDLSTAQFIVALARRTVRSGKGGAELL-EGLASVEVPSNAASRAFVGKLIAR 71
            +REL  WV+D LH ++GFSD +TA FI+A A++     KG A  L   L++  +P NAA  AF G+L++R
Sbjct:    4 DRELRSWVSDRLHELVGFSDRTTADFILAQAKKV----KGSAPALGRHLSAAGLPDNAAVAAFCGELLSR 69          
BLAST of mRNA_H-elongata_contig188911.5186.1 vs. uniprot
Match: A0A8J6C9U5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9U5_DIALT)

HSP 1 Score: 54.7 bits (130), Expect = 6.120e-7
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    3 ERELTRWVADELHGVLGFSDLSTAQFIVALARRTVRSGKGGAELLEGLASVEVPSNAASRAFVGKLIAR 71
            +RE++RWVAD+LH ++G SD     F+V LAR+     +  A L + L + ++P +AA+R F  +L+AR
Sbjct:   11 QREVSRWVADQLHELVGLSDRVLVDFVVELARKE----RSPAALAKQLLTFDLPDSAATRRFAAELVAR 75          
BLAST of mRNA_H-elongata_contig188911.5186.1 vs. uniprot
Match: A0A383V8T8_TETOB (RNA helicase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V8T8_TETOB)

HSP 1 Score: 52.4 bits (124), Expect = 4.000e-6
Identity = 26/69 (37.68%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    3 ERELTRWVADELHGVLGFSDLSTAQFIVALARRTVRSGKGGAELLEGLASVEVPSNAASRAFVGKLIAR 71
            ++EL  WV+D+LH ++GFSD + A F++A A++     K  + LL+ LA+  VP+ ++ +AF   ++AR
Sbjct:    4 DKELRGWVSDQLHSLVGFSDRTVADFVLASAKKA----KDPSSLLKSLAAFGVPAGSSGQAFAEGVLAR 68          
BLAST of mRNA_H-elongata_contig188911.5186.1 vs. uniprot
Match: A0A2V0NYA0_9CHLO (RNA helicase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NYA0_9CHLO)

HSP 1 Score: 52.4 bits (124), Expect = 4.000e-6
Identity = 29/69 (42.03%), Postives = 41/69 (59.42%), Query Frame = 0
Query:    3 ERELTRWVADELHGVLGFSDLSTAQFIVALARRTVRSGKGGAELLEGLASVEVPSNAASRAFVGKLIAR 71
            +REL  WV+D LH V GFSD +TA FI+A AR+   +  G A L   L++  +P      AF  +L++R
Sbjct:    4 DRELRAWVSDRLHDVAGFSDRTTADFILATARK---AKAGPAALARALSAAGLPDTPPVAAFAAELLSR 69          
BLAST of mRNA_H-elongata_contig188911.5186.1 vs. uniprot
Match: A0A482R5H9_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R5H9_9ARCH)

HSP 1 Score: 50.8 bits (120), Expect = 4.450e-6
Identity = 30/70 (42.86%), Postives = 38/70 (54.29%), Query Frame = 0
Query:    2 DERELTRWVADELHGVLGFSDLSTAQFIVALARRTVRSGKGGAELLEGLASVEVPSNAASRAFVGKLIAR 71
            D   +T WVAD LHGVLG+SD S A F V+LA  T       + L   L + +VP   A+  F  +L AR
Sbjct:   31 DTAGVTSWVADALHGVLGYSDASLAAFFVSLATST----PSPSALWASLRAADVPDTPAAHTFADELYAR 96          
BLAST of mRNA_H-elongata_contig188911.5186.1 vs. uniprot
Match: A0A197JRC9_9FUNG (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JRC9_9FUNG)

HSP 1 Score: 49.3 bits (116), Expect = 4.760e-5
Identity = 25/71 (35.21%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 MDERELTRWVADELHGVLGFSDLSTAQFIVALARRTVRSGKGGAELLEGLASVEVPSNAASRAFVGKLIAR 71
            MD ++L RWV+D    VLG SD +T  F++A A+    + K  A+LL+   ++++P+N+ +++F  +L  R
Sbjct:    1 MDPQDLKRWVSDASIKVLGMSDNTTRDFLIACAQ----TAKSPADLLKSFGAMDIPTNSRTQSFAQELFQR 67          
BLAST of mRNA_H-elongata_contig188911.5186.1 vs. uniprot
Match: A0A7J7QBU1_9CHLO (Putative ATP-dependent RNA helicase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QBU1_9CHLO)

HSP 1 Score: 49.3 bits (116), Expect = 4.860e-5
Identity = 24/69 (34.78%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    3 ERELTRWVADELHGVLGFSDLSTAQFIVALARRTVRSGKGGAELLEGLASVEVPSNAASRAFVGKLIAR 71
            ++EL  WV+D+LH ++GFSD + A F++A A++     K  + LL+ L +  VP++++ + F   ++AR
Sbjct:    4 DKELRGWVSDQLHSLVGFSDRTVADFVLASAKKA----KDPSSLLKSLEAFGVPASSSGQVFAEGVLAR 68          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188911.5186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5K0D3_9PHAE8.830e-2061.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHZ7_ECTSI9.830e-1959.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0D2KYR4_9CHLO2.310e-745.71Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
A0A8J6C9U5_DIALT6.120e-740.58Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A383V8T8_TETOB4.000e-637.68RNA helicase n=1 Tax=Tetradesmus obliquus TaxID=30... [more]
A0A2V0NYA0_9CHLO4.000e-642.03RNA helicase n=1 Tax=Raphidocelis subcapitata TaxI... [more]
A0A482R5H9_9ARCH4.450e-642.86Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A197JRC9_9FUNG4.760e-535.21Uncharacterized protein n=1 Tax=Linnemannia elonga... [more]
A0A7J7QBU1_9CHLO4.860e-534.78Putative ATP-dependent RNA helicase n=1 Tax=Scened... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188911contigH-elongata_contig188911:122..337 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188911.5186.1mRNA_H-elongata_contig188911.5186.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig188911 122..337 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig188911.5186.1 ID=prot_H-elongata_contig188911.5186.1|Name=mRNA_H-elongata_contig188911.5186.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
MDERELTRWVADELHGVLGFSDLSTAQFIVALARRTVRSGKGGAELLEGL
ASVEVPSNAASRAFVGKLIAR*
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