prot_H-elongata_contig188623.5168.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig188623.5168.1
Unique Nameprot_H-elongata_contig188623.5168.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
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BLAST of mRNA_H-elongata_contig188623.5168.1 vs. uniprot
Match: A0A6H5KRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY1_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.320e-25
Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 0 
Query:    1 QEGYLWIPVAVERFDQNTIDPLVKMCQVNYAKYSAAPWVLPMGGLLALNSGCAELSRDTVQIVRMTVL 68
            ++G+LWIPV+V +FD    DPLVKMCQVNY  YSAAPW+LPMGGLL++ SGCA+L RDTVQIV M+ L
Sbjct:  193 KDGHLWIPVSVNKFDNLETDPLVKMCQVNYDSYSAAPWLLPMGGLLSIASGCADLKRDTVQIVHMSTL 260
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig188623.5168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KRY1_9PHAE2.320e-2569.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig188623contigH-elongata_contig188623:296..1189 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig188623.5168.1mRNA_H-elongata_contig188623.5168.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig188623 296..1189 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig188623.5168.1 ID=prot_H-elongata_contig188623.5168.1|Name=mRNA_H-elongata_contig188623.5168.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
QEGYLWIPVAVERFDQNTIDPLVKMCQVNYAKYSAAPWVLPMGGLLALNS
GCAELSRDTVQIVRMTVLAV
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