prot_H-elongata_contig18850.5159.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18850.5159.1
Unique Nameprot_H-elongata_contig18850.5159.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Match: D7FN46_ECTSI (50S ribosomal protein L5, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN46_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 8.640e-81
Identity = 118/124 (95.16%), Postives = 121/124 (97.58%), Query Frame = 0
Query:    1 ACYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAIKWFQARFEGIVTG 124
            A YTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDF+VVLNRPGYRVAKRK K AKIGYQHKVTKTDA+KWFQA+FEGIVTG
Sbjct:   50 ARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG 173          
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Match: A0A0D3AUD9_BRAOL (Uncharacterized protein n=10 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3AUD9_BRAOL)

HSP 1 Score: 206 bits (524), Expect = 6.910e-66
Identity = 95/122 (77.87%), Postives = 111/122 (90.98%), Query Frame = 0
Query:    1 ACYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAIKWFQARFEGIV 122
            A YTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ ++EG++
Sbjct:   52 ARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173          
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Match: A0A0K9NLH5_ZOSMR (60S ribosomal protein L11a n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NLH5_ZOSMR)

HSP 1 Score: 205 bits (522), Expect = 1.300e-65
Identity = 93/122 (76.23%), Postives = 111/122 (90.98%), Query Frame = 0
Query:    1 ACYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAIKWFQARFEGIV 122
            A +TVRSFGIRRNEKIACHVTVRG+KA++++E GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ ++EG++
Sbjct:   51 ARFTVRSFGIRRNEKIACHVTVRGEKAMQLIESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRAKARVGIQHRVTKDDAMKWFQVKYEGVI 172          
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Match: A7AQT8_BABBO (60S ribosomal protein L11, putative n=2 Tax=Babesia TaxID=5864 RepID=A7AQT8_BABBO)

HSP 1 Score: 205 bits (521), Expect = 1.380e-65
Identity = 96/120 (80.00%), Postives = 109/120 (90.83%), Query Frame = 0
Query:    3 YTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAIKWFQARFEGIV 122
            +T+RS G+RRNEKIACHVTVRG KALE+LERGLKVKEYELK +NFSNTG+FGFGIQEHIDLGLKYDPSTGIYGMDFYV L RPGYRV KR++  +KIG QHKVTK DA+KWFQ +F+GI+
Sbjct:   50 FTIRSLGVRRNEKIACHVTVRGKKALELLERGLKVKEYELKSENFSNTGNFGFGIQEHIDLGLKYDPSTGIYGMDFYVQLIRPGYRVTKRRKCKSKIGKQHKVTKEDAMKWFQEKFDGII 169          
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Match: A0A3P6F0I7_BRAOL (Uncharacterized protein n=4 Tax=Brassica TaxID=3705 RepID=A0A3P6F0I7_BRAOL)

HSP 1 Score: 205 bits (521), Expect = 1.430e-65
Identity = 94/122 (77.05%), Postives = 111/122 (90.98%), Query Frame = 0
Query:    1 ACYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAIKWFQARFEGIV 122
            A YTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ ++EG++
Sbjct:   42 ARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 163          
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Match: A0A7S2V4A8_9STRA (50S ribosomal protein L5, chloroplastic n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4A8_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.520e-65
Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 0
Query:    1 ACYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAIKWFQARFEGIV 122
            A YTVRSFGIRRNEKIACHVTVRG+KALEILERGLKVKEYEL+R+NFS TG+FGFGIQEHIDLG+KYDPSTGIYGMDF+VVL RPG RV KRK + +++G  H++ K DAIKWFQ +FEGIV
Sbjct:   51 ARYTVRSFGIRRNEKIACHVTVRGEKALEILERGLKVKEYELRRRNFSETGNFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLRRPGNRVGKRKARQSRMGAPHRLAKDDAIKWFQQKFEGIV 172          
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Match: A0A1S4CT55_TOBAC (60S ribosomal protein L11-1-like n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CT55_TOBAC)

HSP 1 Score: 204 bits (520), Expect = 2.720e-65
Identity = 94/122 (77.05%), Postives = 110/122 (90.16%), Query Frame = 0
Query:    1 ACYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAIKWFQARFEGIV 122
            A YTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ ++EG++
Sbjct:   52 ARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173          
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Match: A0A2G5ET61_AQUCA (Ribosomal_L5_C domain-containing protein n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A2G5ET61_AQUCA)

HSP 1 Score: 202 bits (515), Expect = 3.500e-65
Identity = 93/122 (76.23%), Postives = 110/122 (90.16%), Query Frame = 0
Query:    1 ACYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAIKWFQARFEGIV 122
            A YTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRV +R+   ++IG QH+VTK DA+KWFQ ++EG++
Sbjct:    5 ARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRIGIQHRVTKDDAMKWFQVKYEGVI 126          
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Match: A0A1J3EML2_NOCCA (60S ribosomal protein L11-1 (Fragment) n=4 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3EML2_NOCCA)

HSP 1 Score: 205 bits (521), Expect = 4.710e-65
Identity = 94/122 (77.05%), Postives = 111/122 (90.98%), Query Frame = 0
Query:    1 ACYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAIKWFQARFEGIV 122
            A YTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ ++EG++
Sbjct:   79 ARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 200          
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Match: A0A0K9Q188_ZOSMR (60S ribosomal protein L11-1 n=6 Tax=Mesangiospermae TaxID=1437183 RepID=A0A0K9Q188_ZOSMR)

HSP 1 Score: 204 bits (518), Expect = 5.300e-65
Identity = 93/122 (76.23%), Postives = 111/122 (90.98%), Query Frame = 0
Query:    1 ACYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIGYQHKVTKTDAIKWFQARFEGIV 122
            A +TVRSFGIRRNEKIACHVTVRG+KA+++LE GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDF+VVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ ++EG++
Sbjct:   52 ARFTVRSFGIRRNEKIACHVTVRGEKAMQLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18850.5159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN46_ECTSI8.640e-8195.1650S ribosomal protein L5, chloroplastic n=2 Tax=Ec... [more]
A0A0D3AUD9_BRAOL6.910e-6677.87Uncharacterized protein n=10 Tax=Brassicaceae TaxI... [more]
A0A0K9NLH5_ZOSMR1.300e-6576.2360S ribosomal protein L11a n=1 Tax=Zostera marina ... [more]
A7AQT8_BABBO1.380e-6580.0060S ribosomal protein L11, putative n=2 Tax=Babesi... [more]
A0A3P6F0I7_BRAOL1.430e-6577.05Uncharacterized protein n=4 Tax=Brassica TaxID=370... [more]
A0A7S2V4A8_9STRA1.520e-6579.5150S ribosomal protein L5, chloroplastic n=1 Tax=Fi... [more]
A0A1S4CT55_TOBAC2.720e-6577.0560S ribosomal protein L11-1-like n=4 Tax=Nicotiana... [more]
A0A2G5ET61_AQUCA3.500e-6576.23Ribosomal_L5_C domain-containing protein n=2 Tax=M... [more]
A0A1J3EML2_NOCCA4.710e-6577.0560S ribosomal protein L11-1 (Fragment) n=4 Tax=Noc... [more]
A0A0K9Q188_ZOSMR5.300e-6576.2360S ribosomal protein L11-1 n=6 Tax=Mesangiosperma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 1..124
e-value: 1.2E-57
score: 196.5
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 3..122
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 15..113
e-value: 1.9E-22
score: 79.2
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 1..122
NoneNo IPR availablePANTHERPTHR11994:SF21coord: 1..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18850contigH-elongata_contig18850:32..1176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18850.5159.1mRNA_H-elongata_contig18850.5159.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18850 32..2151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18850.5159.1 ID=prot_H-elongata_contig18850.5159.1|Name=mRNA_H-elongata_contig18850.5159.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
ACYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNT
GSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKEKVAKIG
YQHKVTKTDAIKWFQARFEGIVTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022803Ribosomal_L5_dom_sf
IPR031309Ribosomal_L5_C
IPR002132Ribosomal_L5