prot_H-elongata_contig18750.5116.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18750.5116.1
Unique Nameprot_H-elongata_contig18750.5116.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length862
Homology
BLAST of mRNA_H-elongata_contig18750.5116.1 vs. uniprot
Match: D8LRY4_ECTSI (Telomere_reg-2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY4_ECTSI)

HSP 1 Score: 482 bits (1241), Expect = 1.560e-149
Identity = 390/963 (40.50%), Postives = 480/963 (49.84%), Query Frame = 0
Query:    1 RSFFLESLYLPFASFLLRDVGPSWLPVWDAGGA----ATRQSSAVAAASVSRPHS----------PRGVFEAFFRPPAVPASLALLALCEALSSKGKQEVSLDGQQLIPPRSELDSAGDAADSGTAVGMATPGPRTSHVQYVCNLLEPYLDDNSG-----------GLHLLALAVAELAQSTDADLIRVGECT-VKAAEGEKGREGERKGPRYYRDERL--PPLRGGDAAEALASAL-CLAPHRVANGMGTVAPPAFAPAAFYPALCRAALRATMRCFGNGNTERSSAAPRRDAGTGAIASDGFADDVWRAFSGRLLSAGRASDLADAWLRAMA--EEFVGTGRGGGVDQRTGDDEEEEA--AAWEEWA-ADSVGSKIHSRMIARLPASWRKPFTEALLRALWQKNSRERRRLQSYSYGRERSRASPEEKVWPKGFPAVVCRVLIGLPLLSFVQSMATDQIQEDGRVNLDAAAVMNQQREQNSEVKGDVSVGMVEELVLQRPLPSPAAEAIADTLAWCDRRQIAQMTTWKEGGSGGEYGGEDSNQGKRTGQ------LLIGALERVAAVWAEPSFLNHSPPRQQNFQTRFLLAALRGGGT-----GGVDLLSKDHEVLLPLLIRGVGARLDVATRETRLQGMRVGEAVAALSGQELRFAELDDERREAEENPSRSRRRGQAQG-VNPGKPGG--GVDVAATASAAAAFVPGEKPEPGSRSRARRSSGVGKQGAAAVPLASNGAGQAVEVSIMRDDGDKRREHPRSDEEKTDYSAEDDGDDLXXXXXXX-----------------------------------------------------AYDMWDEEEDLAAVAEPIYLDQLIELLRSRDEPETAHKHETALRCAETLVRRRPPDLPHRAAELSRDLLYMENAFDLEGFHKIRAKAMLATVAAAPETCALYLGSEVWGTGASEGTKIEVIN 862
            R+ FLES YLPFASFLLR+VGP WLP WD   +    AT+ +    AA+V+R  +          PR +FEAFFRPPAVP SLALLALCE LS +    ++   +  +     LDS+G    +G  V  A P P     Q +C LL+P+L   S             +  L   V +LA   D   +  GE T  K A+ +  RE      RY  +     PPL GG AAE LAS L CLAP RVAN +G +APP F+PA F+PA+CRA +RAT+    +  T            TG         DVWR F+GRLL+AGRASDLADAWLRAM   ++    G  GG D  +G          AWE WA    V  + H+ M+ RLPAS            L QK                                                      Q Q D   + D A+              D+SVG+VE L+LQRPLP+PAAEAIADTLAWCDRR    +      G+   +G   S  G R G+      LL+GAL+RV AVWAEPSFLN SP RQQ F T FLLAALR GG      GGVD    D + L+ +LIRGVG+ LDV  RETRL+GMRVGEAVAAL G ELRF ELD ER E      R   RG+ QG  + GK     GV+     ++        +  P S+                         Q++  S                               XXXXXXX                                                     AYD+WD+++DLA VAEP+YLDQLIE+LRSR++P+TA +HETALRCAE LVRR PPDL HRA ELSRDLLY+E++FDLE F   R+ A++ATVAAAPE+CALYLGSEVWGTGA+EGTK+++++
Sbjct:  110 RTAFLESSYLPFASFLLREVGPLWLPAWDRAASTNLVATQGTDNGTAAAVTRDDAGNSTGVWSPAPRDLFEAFFRPPAVPPSLALLALCEGLSRQAPDRIATSQRPTLWLDGTLDSSGMGGQAGVLV-EAAPAPDARAAQQICRLLQPFLRKPSALQPPMPPHSREPVPRLVEVVEDLAGGID---VSEGEGTETKGADEDPRRE------RYDAEAGRGPPPLVGGGAAETLASRLLCLAPQRVANSLGPIAPPDFSPAVFFPAVCRAVVRATLNVRSSATTXXXXXXXXXXXATG---------DVWREFTGRLLTAGRASDLADAWLRAMVAGKQDDPVGGSGGNDATSGXXXXXXXXXTAWEAWAEGPDVVPEAHAWMMKRLPAS-----------RLHQKR-----------------------------------------------------QQQGDSGDDDDNAST------------ADISVGLVERLLLQRPLPAPAAEAIADTLAWCDRRSTCTV------GAAARFGAATSEAGCREGEAVSGRGLLMGALKRVGAVWAEPSFLNRSPLRQQEFYTSFLLAALRSGGLDGQLGGGVD---GDQDTLV-ILIRGVGSHLDVPVRETRLRGMRVGEAVAALGGTELRFDELDGEREEQR----REEPRGEGQGETSAGKQESTSGVEGTKGGNSKDGTEGTVRERPRSKXXXXXXXXXXXXXXXXXXXXXXXXWQSLPASFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEAYDLWDDQDDLAKVAEPVYLDQLIEMLRSREKPDTADQHETALRCAENLVRRNPPDLAHRAPELSRDLLYLEDSFDLECFETRRSGALVATVAAAPESCALYLGSEVWGTGATEGTKMQILD 963          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18750.5116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRY4_ECTSI1.560e-14940.50Telomere_reg-2 domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 606..626
NoneNo IPR availablePANTHERPTHR15830FAMILY NOT NAMEDcoord: 53..856
IPR019337Telomere length regulation protein, conserved domainPFAMPF10193Telomere_reg-2coord: 757..861
e-value: 3.0E-20
score: 72.7
IPR038528TEL2, conserved domain superfamilyGENE3D1.25.40.720coord: 752..854
e-value: 8.1E-9
score: 37.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18750contigH-elongata_contig18750:2440..7060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18750.5116.1mRNA_H-elongata_contig18750.5116.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18750 2440..7060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18750.5116.1 ID=prot_H-elongata_contig18750.5116.1|Name=mRNA_H-elongata_contig18750.5116.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=862bp
RSFFLESLYLPFASFLLRDVGPSWLPVWDAGGAATRQSSAVAAASVSRPH
SPRGVFEAFFRPPAVPASLALLALCEALSSKGKQEVSLDGQQLIPPRSEL
DSAGDAADSGTAVGMATPGPRTSHVQYVCNLLEPYLDDNSGGLHLLALAV
AELAQSTDADLIRVGECTVKAAEGEKGREGERKGPRYYRDERLPPLRGGD
AAEALASALCLAPHRVANGMGTVAPPAFAPAAFYPALCRAALRATMRCFG
NGNTERSSAAPRRDAGTGAIASDGFADDVWRAFSGRLLSAGRASDLADAW
LRAMAEEFVGTGRGGGVDQRTGDDEEEEAAAWEEWAADSVGSKIHSRMIA
RLPASWRKPFTEALLRALWQKNSRERRRLQSYSYGRERSRASPEEKVWPK
GFPAVVCRVLIGLPLLSFVQSMATDQIQEDGRVNLDAAAVMNQQREQNSE
VKGDVSVGMVEELVLQRPLPSPAAEAIADTLAWCDRRQIAQMTTWKEGGS
GGEYGGEDSNQGKRTGQLLIGALERVAAVWAEPSFLNHSPPRQQNFQTRF
LLAALRGGGTGGVDLLSKDHEVLLPLLIRGVGARLDVATRETRLQGMRVG
EAVAALSGQELRFAELDDERREAEENPSRSRRRGQAQGVNPGKPGGGVDV
AATASAAAAFVPGEKPEPGSRSRARRSSGVGKQGAAAVPLASNGAGQAVE
VSIMRDDGDKRREHPRSDEEKTDYSAEDDGDDLDDGDGLDAYDMWDEEED
LAAVAEPIYLDQLIELLRSRDEPETAHKHETALRCAETLVRRRPPDLPHR
AAELSRDLLYMENAFDLEGFHKIRAKAMLATVAAAPETCALYLGSEVWGT
GASEGTKIEVIN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019337Telomere_length_regulation_dom
IPR038528TEL2_sf