prot_H-elongata_contig186506.5079.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig186506.5079.1
Unique Nameprot_H-elongata_contig186506.5079.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Match: D7G4M9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M9_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.190e-25
Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 0
Query:    3 GGGFNLSGEAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGLSGVGFVYGIPIALIGLALK 68
            GGG N+SGEAPFEIRGFSLAN A L G+ IT ASF+EYF++GG+ GLSG+GFVYGIPIALIGLALK
Sbjct:   84 GGGINVSGEAPFEIRGFSLANAAALAGLAITCASFYEYFSTGGAGGLSGIGFVYGIPIALIGLALK 149          
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Match: A0A835YHW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.680e-22
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    4 GGFNLSGEAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGLSGVGFVYGIPIALIGLALK 68
            GG N+SGEAPFEIRGFSL N  L+ GV IT ASF EYFTSGG AGLSG+GFVYGIP+ALIGLALK
Sbjct:   77 GGINVSGEAPFEIRGFSLGNAFLIGGVVITTASFAEYFTSGG-AGLSGLGFVYGIPVALIGLALK 140          
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Match: A0A7S2V4E2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4E2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 8.480e-21
Identity = 45/65 (69.23%), Postives = 52/65 (80.00%), Query Frame = 0
Query:    4 GGFNLSGEAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGLSGVGFVYGIPIALIGLALK 68
            GG NLSGE PFEIRGFSL +  L +GV +T  SF E+F S GS GLSG+GFVYGIPIAL+GL+LK
Sbjct:    8 GGINLSGEPPFEIRGFSLGDAFLGVGVAVTAISFTEFFMSAGSEGLSGIGFVYGIPIALVGLSLK 72          
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Match: A0A7S1XTC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTC2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.300e-18
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 0
Query:    4 GGFNLSGEAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGLSGVGFVYGIPIALIGLALK 68
            GG N SGE PFEIRGFSLA   L+ G  +T ASF EYF  GG AGL G+GFVYGIP+ LIGL+LK
Sbjct:   59 GGINTSGEPPFEIRGFSLATSFLVGGFVLTVASFGEYFAEGGGAGLGGIGFVYGIPVLLIGLSLK 123          
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Match: A0A7S1U5M2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5M2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.390e-18
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 0
Query:    4 GGFNLSGEAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGLSGVGFVYGIPIALIGLALK 68
            GG N SGE PFEIRGFSLA   L+ G  +T ASF EYF  GG AGL G+GFVYGIP+ LIGL+LK
Sbjct:   59 GGINTSGEPPFEIRGFSLATSFLVGGFVLTVASFGEYFAEGGGAGLGGIGFVYGIPVLLIGLSLK 123          
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Match: A0A7R9UF83_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF83_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 6.600e-17
Identity = 42/65 (64.62%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    4 GGFNLSGEAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGLSGVGFVYGIPIALIGLALK 68
            GG N SG+ PFEIRGFSLA L L  G  +T  SF EYF+ GG +G+SG+GFVYGIP+ LIGL+LK
Sbjct:   55 GGINTSGKPPFEIRGFSLATLFLGGGFLLTVGSFAEYFSEGGGSGVSGLGFVYGIPVLLIGLSLK 119          
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Match: A0A7S3K6V7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6V7_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 6.770e-17
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    4 GGFNLSGEAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGLSGVGFVYGIPIALIGLALK 68
            GGFN +GE P EIRGFSLA   L  G  +TGASF EYF S G AGLS +GF+YGIPI LIG AL+
Sbjct:   84 GGFNTAGEPPLEIRGFSLAKAFLAGGTLLTGASFAEYFGSQGGAGLSSLGFIYGIPILLIGFALQ 148          
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Match: A0A5J4YMU9_PORPP (Thylakoid membrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMU9_PORPP)

HSP 1 Score: 80.1 bits (196), Expect = 1.380e-16
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:   11 EAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGLSGVGFVYGIPIALIGLALK 68
            E PFEIRGFSLAN    +G+ +TG SFF YFTS G+A  S +GFVYG+PI LIGLALK
Sbjct:   67 EVPFEIRGFSLANFGTALGIVVTGYSFFSYFTSSGTASGSSLGFVYGVPILLIGLALK 124          
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Match: A0A7R9ZUA7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZUA7_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.860e-16
Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 MIGG-GFNLSGEAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGL--SGVGFVYGIPIALIGLALK 68
            M+GG G N +GE PFEIRGFSL N  +L G+ IT  SF EY +  GS GL  SG+GFVYGIP+AL G ALK
Sbjct:   63 MVGGAGVNNAGEPPFEIRGFSLGNFVILSGIAITVLSFAEYLSDSGSDGLNVSGLGFVYGIPVALAGAALK 133          
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Match: A0A7S0UIW3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UIW3_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 6.780e-16
Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 MIGG-GFNLSGEAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGL--SGVGFVYGIPIALIGLALK 68
            M+GG G N +GE PFEIRGFSL N  +L G+ IT  SF EY +  GS GL  SG+GFVYGIP+AL G ALK
Sbjct:   63 MVGGAGVNNAGEPPFEIRGFSLGNFVILSGIAITILSFAEYLSDSGSDGLNVSGLGFVYGIPVALAGAALK 133          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig186506.5079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M9_ECTSI1.190e-2578.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHW7_9STRA3.680e-2280.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V4E2_9STRA8.480e-2169.23Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1XTC2_9STRA1.300e-1867.69Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1U5M2_9STRA2.390e-1867.69Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UF83_9STRA6.600e-1764.62Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3K6V7_9STRA6.770e-1766.15Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A5J4YMU9_PORPP1.380e-1667.24Thylakoid membrane protein n=1 Tax=Porphyridium pu... [more]
A0A7R9ZUA7_9STRA4.860e-1661.97Hypothetical protein n=1 Tax=Pseudo-nitzschia aren... [more]
A0A7S0UIW3_9STRA6.780e-1661.97Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021275Protein of unknown function DUF2854PFAMPF11016DUF2854coord: 37..69
e-value: 1.3E-6
score: 28.4
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 19..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig186506contigH-elongata_contig186506:128..340 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig186506.5079.1mRNA_H-elongata_contig186506.5079.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig186506 125..340 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig186506.5079.1 ID=prot_H-elongata_contig186506.5079.1|Name=mRNA_H-elongata_contig186506.5079.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MIGGGFNLSGEAPFEIRGFSLANLALLIGVGITGASFFEYFTSGGSAGLS
GVGFVYGIPIALIGLALKVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021275DUF2854