prot_H-elongata_contig184997.4994.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig184997.4994.1
Unique Nameprot_H-elongata_contig184997.4994.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length69
Homology
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BLAST of mRNA_H-elongata_contig184997.4994.1 vs. uniprot
Match: A0A6H5KNU7_9PHAE (Carn_acyltransf domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNU7_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 9.150e-17
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 0 
Query:    1 KVHDGTFESDPHPAAPDCLYGHALQCSTARVALKGRDKVELYPESRHAAVFSNNRVFRIDLLGREDGE 68
            +V DGTF+  P  A P C+ G+ALQ   ARVA KGRD V+ YPESRH  VF NNR+F++ LLG EDG+
Sbjct:  134 RVLDGTFQ--PDAARPGCVRGYALQGGGARVAEKGRDTVQHYPESRHVVVFCNNRIFKVGLLGGEDGQ 199
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184997.4994.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNU7_9PHAE9.150e-1758.82Carn_acyltransf domain-containing protein n=2 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042231Choline/Carnitine o-acyltransferase, domain 2GENE3D3.30.559.70coord: 4..69
e-value: 2.0E-5
score: 25.8
NoneNo IPR availableSUPERFAMILY52777CoA-dependent acyltransferasescoord: 3..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig184997contigH-elongata_contig184997:795..1001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig184997.4994.1mRNA_H-elongata_contig184997.4994.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig184997 795..1001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig184997.4994.1 ID=prot_H-elongata_contig184997.4994.1|Name=mRNA_H-elongata_contig184997.4994.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=69bp
KVHDGTFESDPHPAAPDCLYGHALQCSTARVALKGRDKVELYPESRHAAV
FSNNRVFRIDLLGREDGEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042231Cho/carn_acyl_trans_2