prot_H-elongata_contig18246.4894.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18246.4894.1
Unique Nameprot_H-elongata_contig18246.4894.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
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BLAST of mRNA_H-elongata_contig18246.4894.1 vs. uniprot
Match: A0A6H5JD13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD13_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.100e-12
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0 
Query:    1 MQELRAKANIKAEEAATRATVERTEAVRCLRLEHDAEMRKAGSDILRLERQIRRLQVDPTPMAL 64
            MQELR +A  KAE+AATRAT ER+EA+R LRL HD EMRKAG DILRLER+ RR Q    P  +
Sbjct:  780 MQELRREAVAKAEDAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRCQQQQEPSGM 843
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BLAST of mRNA_H-elongata_contig18246.4894.1 vs. uniprot
Match: D7FKN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN2_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.460e-12
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0 
Query:    1 MQELRAKANIKAEEAATRATVERTEAVRCLRLEHDAEMRKAGSDILRLERQIRRLQVDPTPMAL 64
            MQELR +A  KAE+AATRAT ER+EA+R LRL HD EMRKAG DILRLER+ RR Q    P  +
Sbjct:  418 MQELRREAVAKAEDAATRATAERSEALRRLRLAHDTEMRKAGRDILRLEREARRSQQQQEPSGM 481
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18246.4894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JD13_9PHAE1.100e-1265.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKN2_ECTSI1.460e-1265.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18246contigH-elongata_contig18246:1127..2051 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18246.4894.1mRNA_H-elongata_contig18246.4894.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18246 177..3272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18246.4894.1 ID=prot_H-elongata_contig18246.4894.1|Name=mRNA_H-elongata_contig18246.4894.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
MQELRAKANIKAEEAATRATVERTEAVRCLRLEHDAEMRKAGSDILRLER
QIRRLQVDPTPMALFFVFCLSDFPARPCARAFEARHRKARYV*
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