prot_H-elongata_contig18198.4878.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 291 bits (746), Expect = 1.060e-90 Identity = 163/421 (38.72%), Postives = 251/421 (59.62%), Query Frame = 0
Query: 76 EKYSPTPSTASIRMLLATVAAKDGELRHFDAEQAFLTAEIDGELYIEIPKEYRKFPGAVGRLSKAIYGLVQAGRCWNNKFCSDMVAIGFEQGKADPCVFRKVVDGEAEVVVVVHVDDILALAKDKATMDRFAAELGQKFKLKGMGDRQ--------------------------------VLHGLKIPATSGVPTLSKADESRNPEEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKPGPAHKRAAMKFMQYLLHTKDWGITYG-GQGCGLYMEAYTDSDFGACLDTRRSVSGAVLMPAKGKISWYSRMQEVTASGTSEAEYVALSEAVKEVLFLRQVQKFMEPSVRVGAVNVFEDNEGAIKLATNRHASRRTKHIDVKHHTVRDASDAQKVRVVYVRSEDQHGDLLTKPL 463
E Y+PT + +S+R+L A ++ LRHFD +QAF+ +++D ++++ +P+ + G + +L+K++YGL QA R W++ ++ +GF Q AD CVFR + +G V +VVHVDDI ++ +++ D+F +L +K +GD + V +G +IP G+ LS+ D+ EE+ +P+RE +G+LMW AT TRPDIA+AVRAVAR+C P H RA + + Y++ T D GIT+ G GL ME + D+D+ + RRSVSG ++M G ISW+SR Q+ T+EAEYV+L++ +KEVLFLRQV +FM P + + VFEDN+GAI+LA N ++ +KHIDV+HH +R+ +++ + +V S QH D LTK L
Sbjct: 10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 422
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 298 bits (762), Expect = 5.690e-90 Identity = 181/483 (37.47%), Postives = 269/483 (55.69%), Query Frame = 0
Query: 9 WRKAEKIEMRGMVDNCVYKQVAR-PKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATVAAKDGELRHFDAEQAFLTAEIDGELYIEIPKEYRKFPGAVGRLSKAIYGLVQAGRCWNNKFCSDMVAIGFEQGKADPCVFRKVVDGEAEVVVVVHVDDILALAKDKATMDRFAAELGQKFKLKGMGD--------------------------RQVLHGLKIPATSGVPTLSKADESRNPEEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKPGPAHKRAAMKFMQYLLHTKDWGITYGGQGC-GLYMEAYTDSDFGACLDTRRSVSGAVLMPAKGKISWYSRMQEVTASGTSEAEYVALSEAVKEVLFLRQVQKFMEPSVRVGAVNVFEDNEGAIKLATNRHASRRTKHIDVKHHTVRDASDAQKVRVVYVRSEDQHGDLLTKPL 463
W KA E+ G++ + A+ P+ V+ + ++K K + GK+ K K RLVA+GF Q GV Y E +SPT + ASIR+++A + EL H D EQAF +++D E+ +++P G + RL+K++YGL QA R + + SD++ IGFEQ +DPCV R ++ E ++ +HVDDIL A K + LG K +G+ R VL I TS +P S A++SR+ E EE P+RE VG LMW A TRP+ ++AVR VAR +P + +AA K + YL T + Y + Y D+DF + RRSVSGA+++ A +SW+S Q+ + TSEAEY+A+ + VKE LF+ + + + PS + ++VFEDNEGAI LA N +S R+KHIDV+HH +R+ ++ + V +V S++QH D+LTK L
Sbjct: 228 WDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDIL-YAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPA-SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 708
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 294 bits (752), Expect = 1.040e-89 Identity = 178/503 (35.39%), Postives = 282/503 (56.06%), Query Frame = 0
Query: 7 NDWRKAEKIEMRGMVDNCVYKQVARPKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATVAAKDGELRHFDAEQAFLTAEIDGELYIEIPKEYRKF---------PGAVGRLSKAIYGLVQAGRCWNNKFCSDMVAIGFEQGKADPCVFRKVVDGEAEVVVVVHVDDILALAKDKATMDRFAAELGQKFKLKGMGDRQVLHGLKI----------------------------------PATSGVPTLSKADESRNPEEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKPGPAHKRAAMKFMQYLLHTKDWGITYGGQGCGLYMEAYTDSDFGACLDTRRSVSGAVLMPAKGKISWYSRMQEVTASGTSEAEYVALSEAVKEVLFLRQVQKFMEPSVRVGAVNVFEDNEGAIKLATNRHASRRTKHIDVKHHTVRDASDAQKVRVVYVRSEDQHGDLLTKPLDTQ 466
++W+KA E++ ++ N +K V +P + +G + ++ K + G+V +YK RLVA+G+ Q G+ Y E YSP S+R +LA A+ E+ D + AFL E++ E+Y+E+P+ R+ V L +++YGL QA R WN + + GFE ADPCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++K +G + + G++I P GV L+KADE + E+K +M+ PYR VG+LM+ A TRPDI+ AV ++RF E PG H A +K ++YLL TKD GI Y G G EAY+D+D+ D RRSVSG +LM + W S Q+ A ++EAEY+ALS+ VKE +++R++ K + +VGA ++EDN+GA+ LA N RTKHID+++H +R+ + +V + YV +++Q +TK L ++
Sbjct: 79 DEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLAYFMTKGLSSK 577
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 301 bits (771), Expect = 3.050e-89 Identity = 182/483 (37.68%), Postives = 271/483 (56.11%), Query Frame = 0
Query: 9 WRKAEKIEMRGMVDNCVYKQVAR-PKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATVAAKDGELRHFDAEQAFLTAEIDGELYIEIPKEYRKFPGAVGRLSKAIYGLVQAGRCWNNKFCSDMVAIGFEQGKADPCVFRKVVDGEAEVVVVVHVDDILALAKDKATMDRFAAELGQKFKLKGMGD--------------------------RQVLHGLKIPATSGVPTLSKADESRNPEEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKPGPAHKRAAMKFMQYLLHTKDWGITYG-GQGCGLYMEAYTDSDFGACLDTRRSVSGAVLMPAKGKISWYSRMQEVTASGTSEAEYVALSEAVKEVLFLRQVQKFMEPSVRVGAVNVFEDNEGAIKLATNRHASRRTKHIDVKHHTVRDASDAQKVRVVYVRSEDQHGDLLTKPL 463
W A E+ G++ + A+ P V+ + ++K K + GK+ K K RLVA+GF Q GV Y E +SPT + AS R+++A + EL H+D EQAF+ +E+D E+++++P G V RL+K++YGL QA R + + S++ IGFEQ +DPCV R ++ E +V +HVDDIL A K+ + A LG K +G+ R VL + TS +P S ++ R+ E E P+RE VG+LMW A TRPDI++AVRAVAR +P +H +AA K + YLL T + + Y D+DF + + RRSVSGA+++ A + W S+ Q+ + TSEAEY+A+ + VKE LF+ + +F+ PS + ++V EDNEGAI LA N +S R+KHIDV+HH +R+ ++ + V +V SE+QH D+LTK L
Sbjct: 463 WEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKAL 943
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA) HSP 1 Score: 300 bits (768), Expect = 4.860e-89 Identity = 180/503 (35.79%), Postives = 288/503 (57.26%), Query Frame = 0
Query: 7 NDWRKAEKIEMRGMVDNCVYKQVARPKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATVAAKDGELRHFDAEQAFLTAEIDGELYIEIPKEYRKF---------PGAVGRLSKAIYGLVQAGRCWNNKFCSDMVAIGFEQGKADPCVFRKVVDGEAEVVVVVHVDDILALAKDKATMDRFAAELGQKFKLKGMGDRQVLHGLKI----------------------------------PATSGVPTLSKADESRNPEEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKPGPAHKRAAMKFMQYLLHTKDWGITYGGQGCGLYMEAYTDSDFGACLDTRRSVSGAVLMPAKGKISWYSRMQEVTASGTSEAEYVALSEAVKEVLFLRQVQKFMEPSVRVGAVNVFEDNEGAIKLATNRHASRRTKHIDVKHHTVRDASDAQKVRVVYVRSEDQHGDLLTKPLDTQ 466
++W+KA E+ ++ N +K V +P + +G + ++ K + G+V +YK RLVA+G+ Q G+ Y E YSP SIR +L +A+ E+ D + AFL +++ E+Y+E+P+E R+ V L +++YGL QA R WN ++ ++GFE ADPCV+ + +GE E +V ++VDD+L ++ A + A + +KF++K MG + + G++I P GV L+KADE + E+K +M+ PYR VG+LM+ A TRPDI+ AV ++RF E PG H A +K ++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LM + + W S Q+ A ++EAEY+ALS+ VKE +++R++ K + +VGA ++EDN+GA+ LA N RTKHID+++H VR+ + + +V++ YV +++Q D +TK L ++
Sbjct: 410 DEWKKAIASELESLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLEKCSAEGMEIEQCDVDTAFLYEKLEAEIYMELPEELRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKNLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFVREKAVSNEVKLEYVDTKNQLADFMTKGLSSK 908
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 291 bits (746), Expect = 1.210e-88 Identity = 163/421 (38.72%), Postives = 251/421 (59.62%), Query Frame = 0
Query: 76 EKYSPTPSTASIRMLLATVAAKDGELRHFDAEQAFLTAEIDGELYIEIPKEYRKFPGAVGRLSKAIYGLVQAGRCWNNKFCSDMVAIGFEQGKADPCVFRKVVDGEAEVVVVVHVDDILALAKDKATMDRFAAELGQKFKLKGMGDRQ--------------------------------VLHGLKIPATSGVPTLSKADESRNPEEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKPGPAHKRAAMKFMQYLLHTKDWGITYG-GQGCGLYMEAYTDSDFGACLDTRRSVSGAVLMPAKGKISWYSRMQEVTASGTSEAEYVALSEAVKEVLFLRQVQKFMEPSVRVGAVNVFEDNEGAIKLATNRHASRRTKHIDVKHHTVRDASDAQKVRVVYVRSEDQHGDLLTKPL 463
E Y+PT + +S+R+L A ++ LRHFD +QAF+ +++D ++++ +P+ + G + +L+K++YGL QA R W++ ++ +GF Q AD CVFR + +G V +VVHVDDI ++ +++ D+F +L +K +GD + V +G +IP G+ LS+ D+ EE+ +P+RE +G+LMW AT TRPDIA+AVRAVAR+C P H RA + + Y++ T D GIT+ G GL ME + D+D+ + RRSVSG ++M G ISW+SR Q+ T+EAEYV+L++ +KEVLFLRQV +FM P + + VFEDN+GAI+LA N ++ +KHIDV+HH +R+ +++ + +V S QH D LTK L
Sbjct: 184 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLK-LSEFDQD------EEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 596
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Match: A0A6A3DSS8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DSS8_9STRA) HSP 1 Score: 292 bits (747), Expect = 2.800e-88 Identity = 177/503 (35.19%), Postives = 285/503 (56.66%), Query Frame = 0
Query: 7 NDWRKAEKIEMRGMVDNCVYKQVARPKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATVAAKDGELRHFDAEQAFLTAEIDGELYIEIPKEYRKF---------PGAVGRLSKAIYGLVQAGRCWNNKFCSDMVAIGFEQGKADPCVFRKVVDGEAEVVVVVHVDDILALAKDKATMDRFAAELGQKFKLKGMGDRQVLHGLKI----------------------------------PATSGVPTLSKADESRNPEEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKPGPAHKRAAMKFMQYLLHTKDWGITYGGQGCGLYMEAYTDSDFGACLDTRRSVSGAVLMPAKGKISWYSRMQEVTASGTSEAEYVALSEAVKEVLFLRQVQKFMEPSVRVGAVNVFEDNEGAIKLATNRHASRRTKHIDVKHHTVRDASDAQKVRVVYVRSEDQHGDLLTKPLDTQ 466
++W+KA E++ ++ N +K V +P + +G + ++ K + G+V +YK RLVA+G+ Q G+ Y E YSP SIR +LA +A+ E+ D + AFL +++ E+Y+E+ + R+ V L +++YGL QA R WN + ++GFE DPCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++K MG + + G++I P GV L+KADE + E+K +M+ PYR VG+LM+ + TRPDI+ AV ++RF E PG H A +K ++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +LM + W S Q+ A ++EAEY+ALS+ VKE +++R++ K + +VGA ++EDN+GA+ LA N TKHID+++H +RD + + +V++ YV +++Q D +TK L ++
Sbjct: 144 DEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNWDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLIKDIGAE-QVGATVIYEDNQGAMALAKNVGYQAGTKHIDIRYHFIRDKAVSNEVKLEYVDTKNQLADFMTKGLSSK 642
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Match: A0A6H5KN43_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN43_9PHAE) HSP 1 Score: 291 bits (744), Expect = 8.120e-88 Identity = 173/444 (38.96%), Postives = 249/444 (56.08%), Query Frame = 0
Query: 47 KVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATVAAKDGELRHFDAEQAFLTAEIDGELYIEIPKEYRKFPGAVGRLSKAIYGLVQAGRCWNNKFCSDMVAIGFEQGKADPCVFRKVVDGEAEVVVVVHVDDILALAKDKATMDRFAAELGQKFKLKGMGD--------------------------RQVLHGLKIPATSGVPTLSKADESRNPEEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKPGPAHKRAAMKFMQYLLHTKDWGITYGGQGC-GLYMEAYTDSDFGACLDTRRSVSGAVLMPAKGKISWYSRMQEVTASGTSEAEYVALSEAVKEVLFLRQVQKFMEPSVRVGAVNVFEDNEGAIKLATNRHASRRTKHIDVKHHTVRDASDAQKVRVVYVRSEDQHGDLLTKPL 463
+V GK+ K K RLVA+GF Q GV Y E +SPT + ASIR+L+A D E HFD EQAF+ +E+D E+++++P G V RL K++YGL QA R ++ + SD+ IGFEQ +DPCV ++ E ++ +HVDDIL ++ + LG K +G+ R VL + TS +P S ++ R+ E E P+R+ VG+LMW A TRPDI++AVRAVAR +P +H +AA K + YLL T + Y + Y D+DF + RRS SGA+++ A ++W SR Q+ T+EAEYVA+ + VKE LF++ + +F+ PS R+G + V EDNEGAI LA N +S +KHIDV+HH R+ ++ + + +V SE QH D+LTK L
Sbjct: 203 RVSSKGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLLVALACKYDLEFLHFDIEQAFVQSELDHEVFMKLPPGCESMTGKVVRLDKSLYGLRQASRTFHKRLVSDLKRIGFEQSLSDPCVLHFMMGDEVLGMIAIHVDDILYAGIERLA-EMVVEALGDSLPTKNLGEVRFFLGCAFARDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-SLTNDYRSVIEDEGAGDVPFRDVVGSLMWIANQTRPDISNAVRAVARHSHEPNKSHWKAAQKILNYLLETAHLTLKYKQDTMVDVGTLVYVDADFASEATDRRSDSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAMGDGVKEALFVKGMLEFLRPSDRIGKIQVREDNEGAIALAENPLSSCNSKHIDVRHHLFRNLTEEGVLEIRHVSSEGQHADILTKAL 644
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 301 bits (770), Expect = 1.530e-87 Identity = 182/483 (37.68%), Postives = 271/483 (56.11%), Query Frame = 0
Query: 9 WRKAEKIEMRGMVDNCVYKQVAR-PKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATVAAKDGELRHFDAEQAFLTAEIDGELYIEIPKEYRKFPGAVGRLSKAIYGLVQAGRCWNNKFCSDMVAIGFEQGKADPCVFRKVVDGEAEVVVVVHVDDILALAKDKATMDRFAAELGQKFKLKGMGD--------------------------RQVLHGLKIPATSGVPTLSKADESRNPEEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKPGPAHKRAAMKFMQYLLHTKDWGITYG-GQGCGLYMEAYTDSDFGACLDTRRSVSGAVLMPAKGKISWYSRMQEVTASGTSEAEYVALSEAVKEVLFLRQVQKFMEPSVRVGAVNVFEDNEGAIKLATNRHASRRTKHIDVKHHTVRDASDAQKVRVVYVRSEDQHGDLLTKPL 463
W A E+ G++ + A+ P V+ + ++K K + GK+ K K RLVA+GF Q GV Y E +SPT + AS R+++A + EL H+D EQAF+ +E+D E+++++P G V RL+K++YGL QA R + + S++ IGFEQ +DPCV R ++ E +V +HVDDIL A K+ + A LG K +G+ R VL + TS +P S ++ R+ E E P+RE VG+LMW A TRPDI++AVRAVAR +P +H +AA K + YLL T + + Y D+DF + + RRSVSGA+++ A + W S+ Q+ + TSEAEY+A+ + VKE LF+ + +F+ PS + ++V EDNEGAI LA N +S R+KHIDV+HH +R+ ++ + V +V SE+QH D+LTK L
Sbjct: 730 WEGAMSAEVEGLIRAGTFTLAAKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKAL 1210
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE) HSP 1 Score: 288 bits (738), Expect = 9.180e-87 Identity = 180/483 (37.27%), Postives = 261/483 (54.04%), Query Frame = 0
Query: 9 WRKAEKIEMRGMVDNCVYKQVAR-PKDKLVVGTKMLYKRKVGQDGKVEKYKCRLVAQGFWQIEGVHYTEKYSPTPSTASIRMLLATVAAKDGELRHFDAEQAFLTAEIDGELYIEIPKEYRKFPGAVGRLSKAIYGLVQAGRCWNNKFCSDMVAIGFEQGKADPCVFRKVVDGEAEVVVVVHVDDILALAKDKATMDRFAAELGQKFKLKGMGD--------------------------RQVLHGLKIPATSGVPTLSKADESRNPEEKEEMRKFPYREAVGALMWTATMTRPDIASAVRAVARFCEKPGPAHKRAAMKFMQYLLHTKDWGITYG-GQGCGLYMEAYTDSDFGACLDTRRSVSGAVLMPAKGKISWYSRMQEVTASGTSEAEYVALSEAVKEVLFLRQVQKFMEPSVRVGAVNVFEDNEGAIKLATNRHASRRTKHIDVKHHTVRDASDAQKVRVVYVRSEDQHGDLLTKPL 463
W A E G+V + + P V+ + ++K K + GK+ K K RLVA+GF Q G+ Y +SPT + ASIR+L+A + EL H D EQAF+ ++D +++++P G V RL+K++YGL QA R + + SD+ IGFEQ +DPCV R ++ E +V +HVDDIL A K+ + A LG K +G+ R VL + TS +P S +R+ E EE P+RE VG MW A+ TRPDI++ VRAVAR +P +H +AA K + YLL T + + + Y D+DF + RRSVSGA++ A + W SR Q+ A TSEAEY+A+ + VKE LF + +F+ PS + + V EDNEGAI LA N +S R KHIDV+HH +R ++ ++++ +V S++QH D+LTK L
Sbjct: 182 WDVAMSAEFEGLVRAGTFSLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGIDYLLTFSPTANAASIRLLVALACKYNLELLHLDIEQAFVQTKLDHAVFMKLPPGCGTMSGKVVRLNKSLYGLKQASRTFYMRLVSDLKRIGFEQSLSDPCVLRFMMGDEVMGMVAIHVDDIL-YAGSKSLAETVVAALGDSLPTKNLGEVKFFLGCAFRRDREAGTIEISQESYIRSVLERFNVVRTSSIPA-SPTVVNRSVMENEEAGDVPFREVVGCAMWIASQTRPDISNVVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVDADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKAL 662 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18198.4878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig18198.4878.1 ID=prot_H-elongata_contig18198.4878.1|Name=mRNA_H-elongata_contig18198.4878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=467bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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